RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 SPAG11BQ08648 103 aa13.38□□□□□ -0.27
GSDMD-216ENST00000534602 PNRC1Q12796 327 aaPredicted RBP13.38□□□□□ -0.27
GSDMD-216ENST00000534602 GAGE2BQ13066 116 aa13.38□□□□□ -0.27
GSDMD-216ENST00000534602 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
GSDMD-216ENST00000534602 RAB5AP20339 215 aa13.37□□□□□ -0.27
GSDMD-216ENST00000534602 Q6ZRP5 223 aa13.37□□□□□ -0.27
GSDMD-216ENST00000534602 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
GSDMD-216ENST00000534602 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
GSDMD-216ENST00000534602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
GSDMD-216ENST00000534602 SPINK6Q6UWN8 80 aa13.36□□□□□ -0.27
GSDMD-216ENST00000534602 LINC01600Q96MT4 127 aa13.36□□□□□ -0.27
GSDMD-216ENST00000534602 OPRPNQ99935 248 aaPredicted RBP13.36□□□□□ -0.27
GSDMD-216ENST00000534602 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
GSDMD-216ENST00000534602 PYGO1Q9Y3Y4 419 aa13.36□□□□□ -0.27
GSDMD-216ENST00000534602 IFITM10A6NMD0 228 aa13.35□□□□□ -0.27
GSDMD-216ENST00000534602 MT-ND4LP03901 98 aa13.34□□□□□ -0.27
GSDMD-216ENST00000534602 ANAPC16Q96DE5 110 aa13.34□□□□□ -0.27
GSDMD-216ENST00000534602 MRPL35Q9NZE8 188 aaKnown RBP13.34□□□□□ -0.27
GSDMD-216ENST00000534602 IFI27P40305 119 aaPredicted RBP13.33□□□□□ -0.28
GSDMD-216ENST00000534602 RAB14P61106 215 aa13.33□□□□□ -0.28
GSDMD-216ENST00000534602 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
GSDMD-216ENST00000534602 A0A1W2PNN7 141 aa13.32□□□□□ -0.28
GSDMD-216ENST00000534602 SRSF9Q13242 221 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■□□□□ 10.2
GSDMD-216ENST00000534602 TGIF2-C20orf24A0A0A6YYL0 155 aa13.3□□□□□ -0.28
GSDMD-216ENST00000534602 NDUFA1O15239 70 aa13.3□□□□□ -0.28
GSDMD-216ENST00000534602 RPL18AQ02543 176 aaKnown RBP13.3□□□□□ -0.28
GSDMD-216ENST00000534602 C9orf116Q5BN46 136 aaPredicted RBP13.3□□□□□ -0.28
GSDMD-216ENST00000534602 REG3GQ6UW15 175 aa13.3□□□□□ -0.28
GSDMD-216ENST00000534602 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
GSDMD-216ENST00000534602 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
GSDMD-216ENST00000534602 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
GSDMD-216ENST00000534602 A0A087WZ39 114 aa13.28□□□□□ -0.28
GSDMD-216ENST00000534602 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
GSDMD-216ENST00000534602 TMEM141Q96I45 108 aa13.28□□□□□ -0.28
GSDMD-216ENST00000534602 TNXBP22105 4242 aa13.28□□□□□ -0.28
GSDMD-216ENST00000534602 TLX1NBP0CAT3 122 aa13.27□□□□□ -0.29
GSDMD-216ENST00000534602 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
GSDMD-216ENST00000534602 Q8N8P6 123 aa13.27□□□□□ -0.29
GSDMD-216ENST00000534602 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
GSDMD-216ENST00000534602 K7EMI3 77 aa13.26□□□□□ -0.29
GSDMD-216ENST00000534602 UBR4Q5T4S7 5183 aa13.26□□□□□ -0.29
GSDMD-216ENST00000534602 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
GSDMD-216ENST00000534602 CYSLTR1Q9Y271 337 aa13.25□□□□□ -0.29
GSDMD-216ENST00000534602 NPSP0C0P6 89 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 KRTAP10-8P60410 259 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 KIAA0087Q14695 138 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 ORMDL2Q53FV1 153 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 C10orf25Q5T742 122 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 UNQ6190/PRO20217Q6UXQ8 127 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 C2orf88Q9BSF0 95 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
GSDMD-216ENST00000534602 UBE2D1P51668 147 aa13.23□□□□□ -0.29
GSDMD-216ENST00000534602 C2orf66Q6UXQ4 117 aa13.23□□□□□ -0.29
GSDMD-216ENST00000534602 C6orf48Q9UBA6 75 aa13.23□□□□□ -0.29
GSDMD-216ENST00000534602 MT-ND6P03923 174 aa13.22□□□□□ -0.29
GSDMD-216ENST00000534602 CLLU1Q5K131 121 aa13.22□□□□□ -0.29
GSDMD-216ENST00000534602 Q6ZN92 141 aa13.22□□□□□ -0.29
GSDMD-216ENST00000534602 PHF5AQ7RTV0 110 aaKnown RBP13.21□□□□□ -0.29
GSDMD-216ENST00000534602 AMELXQ99217 191 aa13.21□□□□□ -0.29
GSDMD-216ENST00000534602 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
GSDMD-216ENST00000534602 TRBV30A0A0K0K1B3 111 aa13.2□□□□□ -0.3
GSDMD-216ENST00000534602 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
GSDMD-216ENST00000534602 VCX2Q9H322 139 aa13.2□□□□□ -0.3
GSDMD-216ENST00000534602 G0S2P27469 103 aa13.19□□□□□ -0.3
GSDMD-216ENST00000534602 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
GSDMD-216ENST00000534602 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
GSDMD-216ENST00000534602 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
GSDMD-216ENST00000534602 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
GSDMD-216ENST00000534602 UQCC3Q6UW78 93 aa13.17□□□□□ -0.3
GSDMD-216ENST00000534602 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
GSDMD-216ENST00000534602 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 FAM168BA1KXE4 195 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 NDUFC2-KCTD14E9PQ53 114 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 GAGE2EQ4V326 116 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 ZC2HC1BQ5TFG8 222 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 PACRGQ96M98 296 aaPredicted RBP13.15□□□□□ -0.3
GSDMD-216ENST00000534602 GAGE2DQ9UEU5 116 aa13.15□□□□□ -0.3
GSDMD-216ENST00000534602 SEC11AP67812 179 aa13.14□□□□□ -0.31
GSDMD-216ENST00000534602 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
GSDMD-216ENST00000534602 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
GSDMD-216ENST00000534602 TMEM218A2RU14 115 aa13.12□□□□□ -0.31
GSDMD-216ENST00000534602 IGLV7-43P04211 117 aa13.12□□□□□ -0.31
GSDMD-216ENST00000534602 PRSS2P07478 247 aa13.12□□□□□ -0.31
GSDMD-216ENST00000534602 ADCYAP1P18509 176 aa13.12□□□□□ -0.31
GSDMD-216ENST00000534602 FAM19A5Q7Z5A7 132 aaPredicted RBP13.12□□□□□ -0.31
GSDMD-216ENST00000534602 HERVK_113P63121 156 aa13.11□□□□□ -0.31
GSDMD-216ENST00000534602 Q8IZM0 81 aa13.11□□□□□ -0.31
GSDMD-216ENST00000534602 DIRC1Q969H9 104 aa13.11□□□□□ -0.31
GSDMD-216ENST00000534602 TOMM6Q96B49 74 aa13.11□□□□□ -0.31
GSDMD-216ENST00000534602 CKS1BP61024 79 aa13.1□□□□□ -0.31
GSDMD-216ENST00000534602 KRTAP7-1Q8IUC3 87 aa13.1□□□□□ -0.31
GSDMD-216ENST00000534602 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
GSDMD-216ENST00000534602 C6orf226Q5I0X4 101 aa13.09□□□□□ -0.31
GSDMD-216ENST00000534602 KRTAP11-1Q8IUC1 163 aa13.09□□□□□ -0.31
GSDMD-216ENST00000534602 M0QXV9 152 aa13.08□□□□□ -0.32
GSDMD-216ENST00000534602 ODF1Q14990 250 aa13.08□□□□□ -0.32
GSDMD-216ENST00000534602 C9orf129Q5T035 196 aaKnown RBP13.08□□□□□ -0.32
GSDMD-216ENST00000534602 ERASQ7Z444 233 aa13.08□□□□□ -0.32
GSDMD-216ENST00000534602 ALKBH7Q9BT30 221 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms