RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 MRPL18Q9H0U6 180 aaKnown RBP13.62□□□□□ -0.23
PKP3-211ENST00000534401 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
PKP3-211ENST00000534401 G0S2P27469 103 aa13.61□□□□□ -0.23
PKP3-211ENST00000534401 KRTAP10-4P60372 401 aaPredicted RBP13.61□□□□□ -0.23
PKP3-211ENST00000534401 LINC00173Q6ZV60 143 aa13.61□□□□□ -0.23
PKP3-211ENST00000534401 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
PKP3-211ENST00000534401 YPEL4Q96NS1 127 aa13.61□□□□□ -0.23
PKP3-211ENST00000534401 TGIF2-C20orf24A0A0A6YYL0 155 aa13.6□□□□□ -0.23
PKP3-211ENST00000534401 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
PKP3-211ENST00000534401 LINC00526Q96FQ7 95 aa13.6□□□□□ -0.23
PKP3-211ENST00000534401 MALP21145 153 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 FABP9Q0Z7S8 132 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 FAM19A3Q7Z5A8 133 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 PRSS3P2Q8NHM4 247 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 SPACA4Q8TDM5 124 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 C2orf48Q96LS8 159 aa13.59□□□□□ -0.23
PKP3-211ENST00000534401 FLG2Q5D862 2391 aaPredicted RBP13.59□□□□□ -0.23
PKP3-211ENST00000534401 ZNF561-AS1K7EIQ3 104 aa13.58□□□□□ -0.24
PKP3-211ENST00000534401 INAFM2P0DMQ5 153 aa13.58□□□□□ -0.24
PKP3-211ENST00000534401 UBE2D1P51668 147 aa13.58□□□□□ -0.24
PKP3-211ENST00000534401 COX6A2Q02221 97 aa13.58□□□□□ -0.24
PKP3-211ENST00000534401 TIMM17AQ99595 171 aa13.58□□□□□ -0.24
PKP3-211ENST00000534401 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
PKP3-211ENST00000534401 APOMO95445 188 aa13.57□□□□□ -0.24
PKP3-211ENST00000534401 SYCNQ0VAF6 134 aa13.57□□□□□ -0.24
PKP3-211ENST00000534401 TEX43Q6ZNM6 134 aa13.57□□□□□ -0.24
PKP3-211ENST00000534401 OR10D4PQ8NGN7 298 aa13.57□□□□□ -0.24
PKP3-211ENST00000534401 A0A087WZ39 114 aa13.56□□□□□ -0.24
PKP3-211ENST00000534401 PLA2G1BP04054 148 aaKnown RBP13.56□□□□□ -0.24
PKP3-211ENST00000534401 CARD19Q96LW7 228 aa13.56□□□□□ -0.24
PKP3-211ENST00000534401 LINC01549A6NIU2 74 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 F8WDY8 70 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 CHTF8P0CG12 524 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 VCX2Q9H322 139 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 PLAC8Q9NZF1 115 aa13.55□□□□□ -0.24
PKP3-211ENST00000534401 A0A087WYN8 130 aa13.54□□□□□ -0.24
PKP3-211ENST00000534401 ZC2HC1BQ5TFG8 222 aa13.54□□□□□ -0.24
PKP3-211ENST00000534401 ERASQ7Z444 233 aa13.54□□□□□ -0.24
PKP3-211ENST00000534401 TRAPPC1Q9Y5R8 145 aa13.54□□□□□ -0.24
PKP3-211ENST00000534401 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
PKP3-211ENST00000534401 Q6ZN92 141 aa13.53□□□□□ -0.24
PKP3-211ENST00000534401 Q6ZRU5 148 aa13.53□□□□□ -0.24
PKP3-211ENST00000534401 PKIGQ9Y2B9 76 aa13.53□□□□□ -0.24
PKP3-211ENST00000534401 RNF151Q2KHN1 245 aa13.52□□□□□ -0.25
PKP3-211ENST00000534401 C2orf88Q9BSF0 95 aa13.52□□□□□ -0.25
PKP3-211ENST00000534401 A0A096LNI7 61 aa13.51□□□□□ -0.25
PKP3-211ENST00000534401 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
PKP3-211ENST00000534401 KIAA0087Q14695 138 aa13.51□□□□□ -0.25
PKP3-211ENST00000534401 C18orf32Q8TCD1 76 aa13.51□□□□□ -0.25
PKP3-211ENST00000534401 URB1-AS1Q96HZ7 61 aa13.51□□□□□ -0.25
PKP3-211ENST00000534401 ORAOV1Q8WV07 137 aa13.5□□□□□ -0.25
PKP3-211ENST00000534401 CAMK2N2Q96S95 79 aa13.5□□□□□ -0.25
PKP3-211ENST00000534401 FA2HQ7L5A8 372 aa13.49□□□□□ -0.25
PKP3-211ENST00000534401 SLC7A5P1Q8MH63 180 aa13.49□□□□□ -0.25
PKP3-211ENST00000534401 SCGB3A1Q96QR1 104 aa13.49□□□□□ -0.25
PKP3-211ENST00000534401 LINC00474Q9P2X8 69 aa13.49□□□□□ -0.25
PKP3-211ENST00000534401 MRPL35Q9NZE8 188 aaKnown RBP13.48□□□□□ -0.25
PKP3-211ENST00000534401 HERC1Q15751 4861 aa13.48□□□□□ -0.25
PKP3-211ENST00000534401 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
PKP3-211ENST00000534401 A0A096LNJ9 63 aa13.47□□□□□ -0.25
PKP3-211ENST00000534401 LOC107984640A0A0U1RRK4 108 aa13.46□□□□□ -0.25
PKP3-211ENST00000534401 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.46□□□□□ -0.25
PKP3-211ENST00000534401 SEC11AP67812 179 aa13.46□□□□□ -0.25
PKP3-211ENST00000534401 MAJINQ3KP22 176 aa13.46□□□□□ -0.25
PKP3-211ENST00000534401 IGKV2-24A0A0C4DH68 120 aa13.45□□□□□ -0.26
PKP3-211ENST00000534401 LINC00614P0C842 121 aa13.45□□□□□ -0.26
PKP3-211ENST00000534401 PTTG1IPP53801 180 aa13.45□□□□□ -0.26
PKP3-211ENST00000534401 DPH3Q96FX2 82 aa13.45□□□□□ -0.26
PKP3-211ENST00000534401 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
PKP3-211ENST00000534401 HERVK_113P63121 156 aa13.44□□□□□ -0.26
PKP3-211ENST00000534401 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
PKP3-211ENST00000534401 NDUFA1O15239 70 aa13.43□□□□□ -0.26
PKP3-211ENST00000534401 TLX1NBP0CAT3 122 aa13.43□□□□□ -0.26
PKP3-211ENST00000534401 RPL37AP61513 92 aaKnown RBP13.43□□□□□ -0.26
PKP3-211ENST00000534401 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
PKP3-211ENST00000534401 STPG4Q8N801 248 aa13.43□□□□□ -0.26
PKP3-211ENST00000534401 CST9LQ9H4G1 147 aa13.43□□□□□ -0.26
PKP3-211ENST00000534401 IGLV5-45A0A087WSX0 123 aa13.42□□□□□ -0.26
PKP3-211ENST00000534401 A0A0J9YXV3 536 aa13.42□□□□□ -0.26
PKP3-211ENST00000534401 UNQ6190/PRO20217Q6UXQ8 127 aa13.42□□□□□ -0.26
PKP3-211ENST00000534401 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
PKP3-211ENST00000534401 DMBT1Q9UGM3 2413 aaPredicted RBP13.42□□□□□ -0.26
PKP3-211ENST00000534401 TINCRA0A1B0GVN0 87 aa13.41□□□□□ -0.26
PKP3-211ENST00000534401 C6orf48Q9UBA6 75 aa13.41□□□□□ -0.26
PKP3-211ENST00000534401 PKHD1L1Q86WI1 4243 aa13.4□□□□□ -0.26
PKP3-211ENST00000534401 RAB5BP61020 215 aa13.4□□□□□ -0.26
PKP3-211ENST00000534401 PMVKQ15126 192 aa13.4□□□□□ -0.26
PKP3-211ENST00000534401 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
PKP3-211ENST00000534401 Q8IZM0 81 aa13.38□□□□□ -0.27
PKP3-211ENST00000534401 GEMIN7Q9H840 131 aaKnown RBP13.38□□□□□ -0.27
PKP3-211ENST00000534401 TRBV30A0A0K0K1B3 111 aa13.37□□□□□ -0.27
PKP3-211ENST00000534401 HBDP02042 147 aa13.37□□□□□ -0.27
PKP3-211ENST00000534401 GAGE2BQ13066 116 aa13.37□□□□□ -0.27
PKP3-211ENST00000534401 HNRNPA3P51991 378 aaKnown RBP13.36□□□□□ -0.27
PKP3-211ENST00000534401 A0A1W2PNN7 141 aa13.35□□□□□ -0.27
PKP3-211ENST00000534401 C2orf82Q6UX34 121 aa13.35□□□□□ -0.27
PKP3-211ENST00000534401 KRTAP29-1A8MX34 341 aaPredicted RBP13.34□□□□□ -0.27
PKP3-211ENST00000534401 SMIM1B2RUZ4 78 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms