RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 SACSQ9NZJ4 4579 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 K7ERJ3 54 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 M0QXV9 152 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 M0QY20 66 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 RHODO00212 210 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 IGHV3-53P01767 116 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 MGPP08493 103 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 DEFB130BP0DP73 79 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 DEFB130AP0DP74 79 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 GATA1P15976 413 aaPredicted RBP4.31□□□□□ -1.72
CMTM1-220ENST00000534143 RPL13AP40429 203 aaKnown RBP4.31□□□□□ -1.72
CMTM1-220ENST00000534143 FAM74A4Q5TZK3 123 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 SUMO4Q6EEV6 95 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 NRACQ8N912 160 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 EDA2RQ9HAV5 297 aa4.31□□□□□ -1.72
CMTM1-220ENST00000534143 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
CMTM1-220ENST00000534143 IGHV3-73A0A0B4J1V6 119 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 SMKR1H3BMG3 65 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 H7C1H1 209 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 DAD1P61803 113 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 HERV-K104P63124 156 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 Q8N8P6 123 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 PHLDA1Q8WV24 401 aaPredicted RBP4.3□□□□□ -1.72
CMTM1-220ENST00000534143 C20orf78Q9BR46 151 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 LYSTQ99698 3801 aa4.3□□□□□ -1.72
CMTM1-220ENST00000534143 A0A087WX48 190 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 TRBV6-5A0A0K0K1A5 114 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 K7EMI3 77 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 TNFRSF6BO95407 300 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 NPYP01303 97 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 ATP5G1P05496 136 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
CMTM1-220ENST00000534143 LAGE3Q14657 143 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 ZNF56Q15929 161 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 SLC25A29Q8N8R3 303 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 RPL39LQ96EH5 51 aaKnown RBP4.29□□□□□ -1.72
CMTM1-220ENST00000534143 Q9UF83 564 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 CSMD3Q7Z407 3707 aa4.29□□□□□ -1.72
CMTM1-220ENST00000534143 NBEAL2Q6ZNJ1 2754 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 IGLV2-18A0A075B6J9 118 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 TRGV4A0A0C4DH28 118 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 F8VRH5 84 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 K7EQD1 137 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 PPP1R17O96001 155 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 P0DMU3 169 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 FAM231AP0DMU4 169 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 FAM231CP0DMU5 169 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 POLR2KP53803 58 aaKnown RBP4.28□□□□□ -1.72
CMTM1-220ENST00000534143 XGP55808 180 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
CMTM1-220ENST00000534143 RPL32P62910 135 aaKnown RBP4.28□□□□□ -1.72
CMTM1-220ENST00000534143 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 DNAJC30Q96LL9 226 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 PRO0255Q9UI72 69 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
CMTM1-220ENST00000534143 STARD9Q9P2P6 4700 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 TRBV7-3A0A075B6L6 115 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.27□□□□□ -1.73
CMTM1-220ENST00000534143 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 F5H768 121 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 COX6CP09669 75 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 LINC00694P0DN24 101 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
CMTM1-220ENST00000534143 RHOHQ15669 191 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 Q6ZTC4 211 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 TMEM101Q96IK0 257 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
CMTM1-220ENST00000534143 A0A096LNJ9 63 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 TRBV27A0A0K0K1C4 114 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 SDHAF1A6NFY7 115 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 SLC25A20O43772 301 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 HTN3P15516 51 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 UBE2D3P61077 147 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 UBE2D2P62837 147 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 Q1RN00 199 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 ANKRD29Q8N6D5 301 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 ZNRF2Q8NHG8 242 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 PRADC1Q9BSG0 188 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 SMIM2Q9BVW6 85 aa4.26□□□□□ -1.73
CMTM1-220ENST00000534143 MRPL35Q9NZE8 188 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms