RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 PLA2G2AP14555 144 aa12.9□□□□□ -0.34
PAX6-228ENST00000533333 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
PAX6-228ENST00000533333 U3KQK5 164 aa12.89□□□□□ -0.35
PAX6-228ENST00000533333 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
PAX6-228ENST00000533333 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 NLRC5Q86WI3 1866 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 LINC00574Q9H8X3 128 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 TRBV10-3A0A0K0K1G6 114 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 TRAV7A0A075B6U4 112 aa12.88□□□□□ -0.35
PAX6-228ENST00000533333 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
PAX6-228ENST00000533333 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
PAX6-228ENST00000533333 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
PAX6-228ENST00000533333 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
PAX6-228ENST00000533333 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
PAX6-228ENST00000533333 CDC42SE2Q9NRR3 84 aa12.86□□□□□ -0.35
PAX6-228ENST00000533333 H0Y9P7 68 aa12.86□□□□□ -0.35
PAX6-228ENST00000533333 PSPHP1O15172 72 aa12.86□□□□□ -0.35
PAX6-228ENST00000533333 BRI3O95415 125 aa12.86□□□□□ -0.35
PAX6-228ENST00000533333 P0C879 139 aa12.86□□□□□ -0.35
PAX6-228ENST00000533333 TRBV7-7A0A0K0K1E9 115 aa12.85□□□□□ -0.35
PAX6-228ENST00000533333 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
PAX6-228ENST00000533333 LIMD2Q9BT23 127 aa12.85□□□□□ -0.35
PAX6-228ENST00000533333 DEFB116Q30KQ4 102 aa12.85□□□□□ -0.35
PAX6-228ENST00000533333 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
PAX6-228ENST00000533333 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
PAX6-228ENST00000533333 Q6ZS46 218 aa12.84□□□□□ -0.35
PAX6-228ENST00000533333 CRYGAP11844 174 aa12.84□□□□□ -0.35
PAX6-228ENST00000533333 PRR9Q5T870 116 aa12.84□□□□□ -0.35
PAX6-228ENST00000533333 NRACQ8N912 160 aa12.84□□□□□ -0.35
PAX6-228ENST00000533333 Q8N814 137 aa12.83□□□□□ -0.35
PAX6-228ENST00000533333 PRLHP81277 87 aa12.82□□□□□ -0.36
PAX6-228ENST00000533333 BDP1A6H8Y1 2624 aa12.82□□□□□ -0.36
PAX6-228ENST00000533333 A0A087WSZ3 146 aa12.82□□□□□ -0.36
PAX6-228ENST00000533333 IGKV2D-30A0A075B6S6 120 aa12.81□□□□□ -0.36
PAX6-228ENST00000533333 IGKV2-30P06310 120 aa12.81□□□□□ -0.36
PAX6-228ENST00000533333 C11orf71Q6IPW1 123 aa12.81□□□□□ -0.36
PAX6-228ENST00000533333 BRWD1-AS2P59051 145 aa12.81□□□□□ -0.36
PAX6-228ENST00000533333 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
PAX6-228ENST00000533333 C7orf65Q6ZTY9 151 aa12.8□□□□□ -0.36
PAX6-228ENST00000533333 ZFHX2Q9C0A1 2572 aaPredicted RBP12.8□□□□□ -0.36
PAX6-228ENST00000533333 SMR3AQ99954 134 aa12.8□□□□□ -0.36
PAX6-228ENST00000533333 KLLNB2CW77 178 aa12.8□□□□□ -0.36
PAX6-228ENST00000533333 FSTL3O95633 263 aa12.8□□□□□ -0.36
PAX6-228ENST00000533333 PRR3P79522 188 aaKnown RBP12.79□□□□□ -0.36
PAX6-228ENST00000533333 OBSL1O75147 1896 aa12.79□□□□□ -0.36
PAX6-228ENST00000533333 TMEM131Q92545 1883 aa12.79□□□□□ -0.36
PAX6-228ENST00000533333 LINC00575Q6W349 94 aa12.79□□□□□ -0.36
PAX6-228ENST00000533333 NCOA6Q14686 2063 aaPredicted RBP12.78□□□□□ -0.36
PAX6-228ENST00000533333 COX6A2Q02221 97 aa12.78□□□□□ -0.36
PAX6-228ENST00000533333 ACACBO00763 2458 aa12.78□□□□□ -0.36
PAX6-228ENST00000533333 Q6ZTC4 211 aa12.78□□□□□ -0.36
PAX6-228ENST00000533333 MUC6Q6W4X9 2439 aa12.77□□□□□ -0.36
PAX6-228ENST00000533333 SONP18583 2426 aaKnown RBP12.77□□□□□ -0.37
PAX6-228ENST00000533333 A0A087WVE0 104 aa12.77□□□□□ -0.37
PAX6-228ENST00000533333 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
PAX6-228ENST00000533333 POLR2KP53803 58 aaKnown RBP12.76□□□□□ -0.37
PAX6-228ENST00000533333 C11orf21Q9P2W6 132 aa12.76□□□□□ -0.37
PAX6-228ENST00000533333 MGAMO43451 1857 aa12.76□□□□□ -0.37
PAX6-228ENST00000533333 CRIP2P52943 208 aaPredicted RBP12.76□□□□□ -0.37
PAX6-228ENST00000533333 SORL1Q92673 2214 aa12.76□□□□□ -0.37
PAX6-228ENST00000533333 A0A087WYN8 130 aa12.75□□□□□ -0.37
PAX6-228ENST00000533333 XGP55808 180 aa12.75□□□□□ -0.37
PAX6-228ENST00000533333 ARHGAP21Q5T5U3 1957 aa12.75□□□□□ -0.37
PAX6-228ENST00000533333 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
PAX6-228ENST00000533333 LINC00242Q5T6M2 205 aa12.74□□□□□ -0.37
PAX6-228ENST00000533333 hDV103S1A0JD37 113 aa12.74□□□□□ -0.37
PAX6-228ENST00000533333 Q8N3U1 123 aa12.73□□□□□ -0.37
PAX6-228ENST00000533333 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
PAX6-228ENST00000533333 SMIM1B2RUZ4 78 aa12.7□□□□□ -0.38
PAX6-228ENST00000533333 Q8N6K4 173 aa12.7□□□□□ -0.38
PAX6-228ENST00000533333 EIF4EBP1Q13541 118 aaPredicted RBP12.69□□□□□ -0.38
PAX6-228ENST00000533333 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
PAX6-228ENST00000533333 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
PAX6-228ENST00000533333 C2orf91Q6ZV80 131 aa12.69□□□□□ -0.38
PAX6-228ENST00000533333 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
PAX6-228ENST00000533333 CACNA1AO00555 2505 aa12.69□□□□□ -0.38
PAX6-228ENST00000533333 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
PAX6-228ENST00000533333 A0A1B0GU69 56 aa12.68□□□□□ -0.38
PAX6-228ENST00000533333 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 EDN2P20800 178 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 C1orf64Q8NEQ6 169 aa12.67□□□□□ -0.38
PAX6-228ENST00000533333 MED12LQ86YW9 2145 aa12.66□□□□□ -0.38
PAX6-228ENST00000533333 F8WDY8 70 aa12.66□□□□□ -0.38
PAX6-228ENST00000533333 FHL2Q14192 279 aa12.65□□□□□ -0.38
PAX6-228ENST00000533333 Q6ZPA2 131 aa12.65□□□□□ -0.38
PAX6-228ENST00000533333 Q9UF83 564 aa12.65□□□□□ -0.38
PAX6-228ENST00000533333 IGIPA6NJ69 53 aa12.64□□□□□ -0.39
PAX6-228ENST00000533333 SMCR5Q8TEV8 140 aa12.63□□□□□ -0.39
PAX6-228ENST00000533333 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
PAX6-228ENST00000533333 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
PAX6-228ENST00000533333 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
PAX6-228ENST00000533333 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
PAX6-228ENST00000533333 SERTAD4-AS1Q5TG53 156 aa12.61□□□□□ -0.39
PAX6-228ENST00000533333 Q8N2B8 174 aa12.61□□□□□ -0.39
PAX6-228ENST00000533333 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms