RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 Q9H8V8 135 aa10.76□□□□□ -0.69
TRIM3-213ENST00000533309 IGKV2D-26A0A0A0MRZ7 120 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 TMEM223A0PJW6 202 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 CCL25O15444 150 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 SS18Q15532 418 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 UBE2WQ96B02 151 aa10.75□□□□□ -0.69
TRIM3-213ENST00000533309 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
TRIM3-213ENST00000533309 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
TRIM3-213ENST00000533309 CRPP02741 224 aa10.73□□□□□ -0.69
TRIM3-213ENST00000533309 XCL1P47992 114 aa10.73□□□□□ -0.69
TRIM3-213ENST00000533309 ALMS1Q8TCU4 4167 aa10.73□□□□□ -0.69
TRIM3-213ENST00000533309 MIAQ16674 131 aa10.73□□□□□ -0.69
TRIM3-213ENST00000533309 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
TRIM3-213ENST00000533309 E9PLD3 99 aa10.72□□□□□ -0.69
TRIM3-213ENST00000533309 KRTAP1-5Q9BYS1 174 aa10.72□□□□□ -0.69
TRIM3-213ENST00000533309 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
TRIM3-213ENST00000533309 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
TRIM3-213ENST00000533309 IBA57-AS1B1ANH7 110 aa10.71□□□□□ -0.69
TRIM3-213ENST00000533309 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
TRIM3-213ENST00000533309 CD164L2Q6UWJ8 174 aa10.71□□□□□ -0.69
TRIM3-213ENST00000533309 A0A087WZ39 114 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 SMIM1B2RUZ4 78 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 H3BRM9 83 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 HERVK_113P61574 105 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 FOXI1Q12951 378 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 KRTAP26-1Q6PEX3 210 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
TRIM3-213ENST00000533309 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 NMUP48645 174 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 TSPEAR-AS2P59090 65 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 C5orf38Q86SI9 138 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 C14orf144Q96I85 54 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 TP73-AS1Q9UF72 201 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 DNAH10Q8IVF4 4471 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 IGHV1-58A0A0C4DH39 117 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 C3orf84H3BNL1 204 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 PCP2Q8IVA1 136 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 TTTY13Q9BZ97 58 aa10.69□□□□□ -0.7
TRIM3-213ENST00000533309 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
TRIM3-213ENST00000533309 K7EP13 123 aa10.68□□□□□ -0.7
TRIM3-213ENST00000533309 COX8AP10176 69 aa10.67□□□□□ -0.7
TRIM3-213ENST00000533309 Q9HAA7 133 aa10.67□□□□□ -0.7
TRIM3-213ENST00000533309 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
TRIM3-213ENST00000533309 LEPROTO15243 131 aa10.66□□□□□ -0.7
TRIM3-213ENST00000533309 J3QQQ9 107 aa10.66□□□□□ -0.7
TRIM3-213ENST00000533309 COX7A2LO14548 114 aa10.66□□□□□ -0.7
TRIM3-213ENST00000533309 C1orf43Q9BWL3 253 aa10.66□□□□□ -0.7
TRIM3-213ENST00000533309 TSTD3H0UI37 97 aa10.65□□□□□ -0.7
TRIM3-213ENST00000533309 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
TRIM3-213ENST00000533309 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
TRIM3-213ENST00000533309 MAPKAPK5-AS1Q8N8E1 139 aa10.65□□□□□ -0.7
TRIM3-213ENST00000533309 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
TRIM3-213ENST00000533309 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
TRIM3-213ENST00000533309 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
TRIM3-213ENST00000533309 SLC25A34Q6PIV7 304 aa10.63□□□□□ -0.71
TRIM3-213ENST00000533309 UQCR10Q9UDW1 63 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 DNAH2Q9P225 4427 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 DLEU1O43261 78 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 LGALS3P17931 250 aaKnown RBP10.62□□□□□ -0.71
TRIM3-213ENST00000533309 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
TRIM3-213ENST00000533309 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
TRIM3-213ENST00000533309 MALP21145 153 aa10.6□□□□□ -0.71
TRIM3-213ENST00000533309 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
TRIM3-213ENST00000533309 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
TRIM3-213ENST00000533309 C2orf91Q6ZV80 131 aa10.59□□□□□ -0.71
TRIM3-213ENST00000533309 ORAOV1Q8WV07 137 aa10.59□□□□□ -0.71
TRIM3-213ENST00000533309 RMI2Q96E14 147 aa10.59□□□□□ -0.71
TRIM3-213ENST00000533309 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
TRIM3-213ENST00000533309 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 TOMM7Q9P0U1 55 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 LY6G6CO95867 125 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 Q8IZM0 81 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 C15orf56Q8N910 161 aa10.58□□□□□ -0.72
TRIM3-213ENST00000533309 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
TRIM3-213ENST00000533309 PCP4L1A6NKN8 68 aa10.57□□□□□ -0.72
TRIM3-213ENST00000533309 NDUFA1O15239 70 aa10.57□□□□□ -0.72
TRIM3-213ENST00000533309 APOMO95445 188 aa10.57□□□□□ -0.72
TRIM3-213ENST00000533309 DDTP30046 118 aa10.57□□□□□ -0.72
TRIM3-213ENST00000533309 Q6ZR54 194 aa10.57□□□□□ -0.72
TRIM3-213ENST00000533309 M0R2N4 97 aa10.56□□□□□ -0.72
TRIM3-213ENST00000533309 COX11Q9Y6N1 276 aa10.55□□□□□ -0.72
TRIM3-213ENST00000533309 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
TRIM3-213ENST00000533309 HYDINQ4G0P3 5121 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 PRSS2P07478 247 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 HNRNPA3P51991 378 aaKnown RBP10.54□□□□□ -0.72
TRIM3-213ENST00000533309 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
TRIM3-213ENST00000533309 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
TRIM3-213ENST00000533309 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
TRIM3-213ENST00000533309 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
TRIM3-213ENST00000533309 C6orf223Q8N319 242 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms