RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SLC25A34Q6PIV7 304 aa7.51□□□□□ -1.21
TRAPPC4-211ENST00000533012 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
TRAPPC4-211ENST00000533012 TNP2Q05952 138 aa7.5□□□□□ -1.21
TRAPPC4-211ENST00000533012 C2orf66Q6UXQ4 117 aa7.5□□□□□ -1.21
TRAPPC4-211ENST00000533012 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
TRAPPC4-211ENST00000533012 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
TRAPPC4-211ENST00000533012 PYGO1Q9Y3Y4 419 aa7.5□□□□□ -1.21
TRAPPC4-211ENST00000533012 IGLV10-54A0A075B6I4 117 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 PLNP26678 52 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 PAPPA-AS1Q5QFB9 102 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 LINC00173Q6ZV60 143 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 TOMM6Q96B49 74 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
TRAPPC4-211ENST00000533012 LINC00959A0A1B0GUT2 108 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 EREGO14944 169 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 DPM2O94777 84 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 NPSP0C0P6 89 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 SS18Q15532 418 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 SCGB3A1Q96QR1 104 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 OPRPNQ99935 248 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
TRAPPC4-211ENST00000533012 CCL25O15444 150 aa7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 IGKCP01834 107 aa7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 Q6ZUT4 128 aa7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 ERASQ7Z444 233 aa7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 TMEM141Q96I45 108 aa7.47□□□□□ -1.21
TRAPPC4-211ENST00000533012 IGLV4-3A0A075B6K6 122 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 A0A087WTM6 91 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 TRAV13-1A0A0B4J241 112 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 IGIPA6NJ69 53 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 COX8AP10176 69 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 COL5A1-AS1Q5SY13 56 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 MAPKAPK5-AS1Q8N8E1 139 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 BAALCQ8WXS3 180 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 CHCHD10Q8WYQ3 142 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 VCX2Q9H322 139 aa7.46□□□□□ -1.22
TRAPPC4-211ENST00000533012 hDV102S1A0JD36 115 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 F8VRH5 84 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 DLEU1O43261 78 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 ODF1Q14990 250 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 TIMM17AQ99595 171 aa7.45□□□□□ -1.22
TRAPPC4-211ENST00000533012 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
TRAPPC4-211ENST00000533012 XCL1P47992 114 aa7.44□□□□□ -1.22
TRAPPC4-211ENST00000533012 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
TRAPPC4-211ENST00000533012 SNHG12Q9BXW3 62 aa7.44□□□□□ -1.22
TRAPPC4-211ENST00000533012 LECT2O14960 151 aa7.43□□□□□ -1.22
TRAPPC4-211ENST00000533012 HERVK_113P61574 105 aa7.43□□□□□ -1.22
TRAPPC4-211ENST00000533012 AMELXQ99217 191 aa7.43□□□□□ -1.22
TRAPPC4-211ENST00000533012 CHTOPQ9Y3Y2 248 aaKnown RBP7.43□□□□□ -1.22
TRAPPC4-211ENST00000533012 DNAH11Q96DT5 4516 aa7.43□□□□□ -1.22
TRAPPC4-211ENST00000533012 PKD1P98161 4303 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 FOXI1Q12951 378 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 MAJINQ3KP22 176 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 C14orf177Q52M58 125 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 Q8N814 137 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
TRAPPC4-211ENST00000533012 USP17L23D6RBM5 183 aa7.41□□□□□ -1.22
TRAPPC4-211ENST00000533012 PMVKQ15126 192 aa7.41□□□□□ -1.22
TRAPPC4-211ENST00000533012 BATFQ16520 125 aa7.41□□□□□ -1.22
TRAPPC4-211ENST00000533012 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
TRAPPC4-211ENST00000533012 COX7A2LO14548 114 aa7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 UBE2D1P51668 147 aa7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 WFDC2Q14508 124 aa7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 CST9LQ9H4G1 147 aa7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 MRPL35Q9NZE8 188 aaKnown RBP7.4□□□□□ -1.22
TRAPPC4-211ENST00000533012 MALP21145 153 aa7.39□□□□□ -1.23
TRAPPC4-211ENST00000533012 NMUP48645 174 aa7.39□□□□□ -1.23
TRAPPC4-211ENST00000533012 SEC11AP67812 179 aa7.39□□□□□ -1.23
TRAPPC4-211ENST00000533012 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
TRAPPC4-211ENST00000533012 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 A6NDN8 102 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 HSD52Q0P140 79 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 NTN5Q8WTR8 489 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 HIGD1BQ9P298 99 aa7.38□□□□□ -1.23
TRAPPC4-211ENST00000533012 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 APOMO95445 188 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 HERVK_113P63121 156 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 COX6A2Q02221 97 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 STPG4Q8N801 248 aa7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
TRAPPC4-211ENST00000533012 C16orf90A8MZG2 172 aa7.36□□□□□ -1.23
TRAPPC4-211ENST00000533012 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC4-211ENST00000533012 TAL2Q16559 108 aa7.36□□□□□ -1.23
TRAPPC4-211ENST00000533012 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms