RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 NUP35Q8NFH5 326 aa5.99□□□□□ -1.45
PPFIA1-223ENST00000532793 C2orf48Q96LS8 159 aa5.99□□□□□ -1.45
PPFIA1-223ENST00000532793 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
PPFIA1-223ENST00000532793 LINC00862A6NCI5 91 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 C9JQL5 133 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 S100A8P05109 93 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 SRP19P09132 144 aaKnown RBP5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 CKS2P33552 79 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 ADIRFQ15847 76 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 TMEM241Q24JQ0 296 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 FAM74A3Q4VXF1 159 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 V9GYV3 84 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
PPFIA1-223ENST00000532793 A0A1B0GW15 77 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 C9orf116Q5BN46 136 aaPredicted RBP5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 FAM104BQ5XKR9 115 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 Q6ZUT4 128 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 NRACQ8N912 160 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 OR10D4PQ8NGN7 298 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 TIMM21Q9BVV7 248 aa5.97□□□□□ -1.45
PPFIA1-223ENST00000532793 F8W036 122 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 F8WDY8 70 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 NDUFA1O15239 70 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 MRPL51Q4U2R6 128 aaKnown RBP5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 C1orf137Q5JT78 98 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 ORAOV1Q8WV07 137 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 NAT8Q9UHE5 227 aa5.96□□□□□ -1.46
PPFIA1-223ENST00000532793 TGIF2-C20orf24A0A0A6YYL0 155 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 RAB5AP20339 215 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 HBBP68871 147 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 SRSF3P84103 164 aaKnown RBP5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 PEA15Q15121 130 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 RNF151Q2KHN1 245 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 OPRPNQ99935 248 aaPredicted RBP5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 SPANXA1Q9NS26 97 aa5.95□□□□□ -1.46
PPFIA1-223ENST00000532793 TRBV24-1A0A075B6N3 115 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 SMIM27A0A1W2PRY6 76 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 IFITM10A6NMD0 228 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 IFI27P40305 119 aaPredicted RBP5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 RPL32P62910 135 aaKnown RBP5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 MRPL35Q9NZE8 188 aaKnown RBP5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 HMCN2Q8NDA2 5059 aa5.94□□□□□ -1.46
PPFIA1-223ENST00000532793 A0A087WZ39 114 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 D6R8Y8 96 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 PPBPP02775 128 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 RPL39P62891 51 aaKnown RBP5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 ODF1Q14990 250 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 MRPL54Q6P161 138 aaKnown RBP5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 DIRC1Q969H9 104 aa5.93□□□□□ -1.46
PPFIA1-223ENST00000532793 MRPS36P82909 103 aaKnown RBP5.92□□□□□ -1.46
PPFIA1-223ENST00000532793 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
PPFIA1-223ENST00000532793 GAGE2DQ9UEU5 116 aa5.92□□□□□ -1.46
PPFIA1-223ENST00000532793 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 NPYP01303 97 aa5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 UBE2BP63146 152 aa5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 ORMDL3Q8N138 153 aa5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 PACRGQ96M98 296 aaPredicted RBP5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 SMDT1Q9H4I9 107 aa5.91□□□□□ -1.46
PPFIA1-223ENST00000532793 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
PPFIA1-223ENST00000532793 TLX1NBP0CAT3 122 aa5.9□□□□□ -1.46
PPFIA1-223ENST00000532793 Q6ZN92 141 aa5.9□□□□□ -1.46
PPFIA1-223ENST00000532793 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
PPFIA1-223ENST00000532793 C2orf88Q9BSF0 95 aa5.9□□□□□ -1.46
PPFIA1-223ENST00000532793 TRBV30A0A0K0K1B3 111 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 PRSS2P07478 247 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 UBE2D1P51668 147 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 UNQ6190/PRO20217Q6UXQ8 127 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 TMEM136Q6ZRR5 245 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 ATP5L2Q7Z4Y8 100 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 TMEM141Q96I45 108 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 PRELID3AQ96N28 172 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 C6orf48Q9UBA6 75 aa5.89□□□□□ -1.47
PPFIA1-223ENST00000532793 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 H0Y9J4 135 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 M0QXV9 152 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 MAP1LC3AQ9H492 121 aa5.88□□□□□ -1.47
PPFIA1-223ENST00000532793 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 A0A1B0GXF2 115 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 CKS1BP61024 79 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 LAMTOR2Q9Y2Q5 125 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 PYGO1Q9Y3Y4 419 aa5.87□□□□□ -1.47
PPFIA1-223ENST00000532793 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
PPFIA1-223ENST00000532793 IGLV4-3A0A075B6K6 122 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms