RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-208	ENST00000532575	IGLV1-50	A0A075B6I6	118 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	SDHAF1	A6NFY7	115 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575		I3L3M4	83 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	APOM	O95445	188 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	PMCH	P20382	165 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	CTRL	P40313	264 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	CCL20	P78556	96 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	PRR4	Q16378	134 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	KIAA1644	Q3SXP7	199 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	CNFN	Q9BYD5	112 aa		4.99	□□□□□ -1.61
CDC27-208	ENST00000532575	TRAV1-1	A0A0B4J248	108 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	HMSD	A8MTL9	139 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	BCL2L11	O43521	198 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	IGLV7-43	P04211	117 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	NOTCH2NL	Q7Z3S9	236 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	NUP35	Q8NFH5	326 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	MRAP2	Q96G30	205 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	CAMK2N2	Q96S95	79 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	MUC2	Q02817	5179 aa		4.98	□□□□□ -1.61
CDC27-208	ENST00000532575	C1orf196	B1AJZ1	125 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575		H0Y9J4	135 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	TEX46	H3BTG2	121 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	COX7A2L	O14548	114 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	PDE6D	O43924	150 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	BCL2	P10415	239 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	ESD	P10768	282 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	RPL13A	P40429	203 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	UBE2D1	P51668	147 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	SMAGP	Q0VAQ4	97 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	ZNF345	Q14585	488 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	RPL39L	Q96EH5	51 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	C2orf48	Q96LS8	159 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	CDC42SE2	Q9NRR3	84 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575	GNG13	Q9P2W3	67 aa		4.97	□□□□□ -1.61
CDC27-208	ENST00000532575		A0A087WZ39	114 aa		4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	KANTR	A0A1W2PQU2	76 aa		4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	RAB19	A4D1S5	217 aa		4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	MEF2B	Q02080	365 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	RPL18A	Q02543	176 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	PHF5A	Q7RTV0	110 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	MRPL52	Q86TS9	123 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	ST20	Q9HBF5	79 aa		4.96	□□□□□ -1.62
CDC27-208	ENST00000532575	IGLV9-49	A0A0B4J1Y8	123 aa		4.95	□□□□□ -1.62
CDC27-208	ENST00000532575	TRBV6-5	A0A0K0K1A5	114 aa		4.95	□□□□□ -1.62
CDC27-208	ENST00000532575	IMMP2L	Q96T52	175 aa		4.95	□□□□□ -1.62
CDC27-208	ENST00000532575	RPP21	Q9H633	154 aa	Known RBP	4.95	□□□□□ -1.62
CDC27-208	ENST00000532575	MED9	Q9NWA0	146 aa		4.95	□□□□□ -1.62
CDC27-208	ENST00000532575	C7orf77	A4D0Y5	90 aa		4.94	□□□□□ -1.62
CDC27-208	ENST00000532575		F8WDY8	70 aa		4.94	□□□□□ -1.62
CDC27-208	ENST00000532575	OPRPN	Q99935	248 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC27-208	ENST00000532575	TMEM242	Q9NWH2	141 aa		4.94	□□□□□ -1.62
CDC27-208	ENST00000532575	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.94	□□□□□ -1.62
CDC27-208	ENST00000532575	CSDC2	Q9Y534	153 aa	Known RBP	4.94	□□□□□ -1.62
CDC27-208	ENST00000532575		A0A1B0GVG6	124 aa		4.93	□□□□□ -1.62
CDC27-208	ENST00000532575	KRTAP10-7	P60409	375 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC27-208	ENST00000532575	SPAG11B	Q08648	103 aa		4.93	□□□□□ -1.62
CDC27-208	ENST00000532575	TCTE3	Q8IZS6	198 aa		4.93	□□□□□ -1.62
CDC27-208	ENST00000532575	TRBV20OR9-2	A0A075B6H5	130 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	TRAV13-1	A0A0B4J241	112 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	TRBV27	A0A0K0K1C4	114 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575		A8MWL6	223 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	KRTAP1-4	P0C5Y4	121 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	FCER1G	P30273	86 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	TAGLN2	P37802	199 aa	Known RBP	4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	POLR2K	P53803	58 aa	Known RBP	4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	FOXA3	P55318	350 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	TMEM241	Q24JQ0	296 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	C5orf38	Q86SI9	138 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	OR10D4P	Q8NGN7	298 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	BORCS7	Q96B45	105 aa		4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	RNASE7	Q9H1E1	156 aa	Known RBP	4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	MRPL35	Q9NZE8	188 aa	Known RBP	4.92	□□□□□ -1.62
CDC27-208	ENST00000532575	NDUFA1	O15239	70 aa		4.91	□□□□□ -1.62
CDC27-208	ENST00000532575	PPP1R17	O96001	155 aa		4.91	□□□□□ -1.62
CDC27-208	ENST00000532575	TLX1NB	P0CAT3	122 aa		4.91	□□□□□ -1.62
CDC27-208	ENST00000532575	UBE2B	P63146	152 aa		4.91	□□□□□ -1.62
CDC27-208	ENST00000532575		A0A087X002	238 aa		4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	GATC	O43716	136 aa	Known RBP	4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	OCC1	Q8TAD7	63 aa		4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	KIR2DL4	Q99706	377 aa		4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	UBE2D4	Q9Y2X8	147 aa		4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	PYGO1	Q9Y3Y4	419 aa		4.9	□□□□□ -1.63
CDC27-208	ENST00000532575	FAM168B	A1KXE4	195 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575		K7EN84	100 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	ALKAL2	Q6UX46	152 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	AKAP14	Q86UN6	197 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	SLC51B	Q86UW2	128 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	ORAOV1	Q8WV07	137 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	PRAC1	Q96KF2	57 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	TIMM21	Q9BVV7	248 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	TMEM191A	Q9H0A3	160 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575	FAT4	Q6V0I7	4981 aa		4.89	□□□□□ -1.63
CDC27-208	ENST00000532575		A0A1B0GUT8	65 aa		4.88	□□□□□ -1.63
CDC27-208	ENST00000532575		M0QXV9	152 aa		4.88	□□□□□ -1.63
CDC27-208	ENST00000532575	ZNF861P	O60384	105 aa		4.88	□□□□□ -1.63
CDC27-208	ENST00000532575	TSPAN13	O95857	204 aa		4.88	□□□□□ -1.63
CDC27-208	ENST00000532575	RAB4A	P20338	218 aa		4.88	□□□□□ -1.63
CDC27-208	ENST00000532575	RNASE13	Q5GAN3	156 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms