RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	HIGD2A	Q9BW72	106 aa		11.23	□□□□□ -0.61
PPFIA1-222	ENST00000532504	KRTAP1-1	Q07627	177 aa		11.23	□□□□□ -0.61
PPFIA1-222	ENST00000532504	UBE2D4	Q9Y2X8	147 aa		11.23	□□□□□ -0.61
PPFIA1-222	ENST00000532504		Q6ZSN1	163 aa		11.23	□□□□□ -0.61
PPFIA1-222	ENST00000532504	HIST1H4A	P62805	103 aa	Known RBP	11.22	□□□□□ -0.61
PPFIA1-222	ENST00000532504	CNFN	Q9BYD5	112 aa		11.21	□□□□□ -0.61
PPFIA1-222	ENST00000532504	DSCR8	Q96T75	97 aa		11.2	□□□□□ -0.62
PPFIA1-222	ENST00000532504	TRBV20-1	A0A075B6N2	111 aa		11.2	□□□□□ -0.62
PPFIA1-222	ENST00000532504	WFDC10B	Q8IUB3	73 aa		11.2	□□□□□ -0.62
PPFIA1-222	ENST00000532504	LAMA1	P25391	3075 aa		11.2	□□□□□ -0.62
PPFIA1-222	ENST00000532504		Q6ZVH6	145 aa		11.19	□□□□□ -0.62
PPFIA1-222	ENST00000532504	PYGO1	Q9Y3Y4	419 aa		11.19	□□□□□ -0.62
PPFIA1-222	ENST00000532504	C9orf118	A6NHY6	69 aa		11.19	□□□□□ -0.62
PPFIA1-222	ENST00000532504	DIRC1	Q969H9	104 aa		11.19	□□□□□ -0.62
PPFIA1-222	ENST00000532504	KRTAP10-3	P60369	221 aa		11.18	□□□□□ -0.62
PPFIA1-222	ENST00000532504	WFDC9	Q8NEX5	89 aa		11.18	□□□□□ -0.62
PPFIA1-222	ENST00000532504	MAP1A	P78559	2803 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA1-222	ENST00000532504		A0A0J9YXY3	114 aa		11.18	□□□□□ -0.62
PPFIA1-222	ENST00000532504	CDC42SE2	Q9NRR3	84 aa		11.18	□□□□□ -0.62
PPFIA1-222	ENST00000532504	IGLV4-60	A0A075B6I1	120 aa		11.17	□□□□□ -0.62
PPFIA1-222	ENST00000532504	C4orf48	Q5BLP8	95 aa		11.17	□□□□□ -0.62
PPFIA1-222	ENST00000532504	LYPD5	Q6UWN5	251 aa		11.17	□□□□□ -0.62
PPFIA1-222	ENST00000532504	LINC00694	P0DN24	101 aa		11.17	□□□□□ -0.62
PPFIA1-222	ENST00000532504	RPL32	P62910	135 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504	TMEM223	A0PJW6	202 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504	ORMDL1	Q9P0S3	153 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504		H3BMG7	143 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504	FXYD2	P54710	66 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504	FAM19A1	Q7Z5A9	133 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504	C7orf33	Q8WU49	177 aa		11.16	□□□□□ -0.62
PPFIA1-222	ENST00000532504		A0A096LNI7	61 aa		11.15	□□□□□ -0.62
PPFIA1-222	ENST00000532504	C9orf153	Q5TBE3	101 aa		11.15	□□□□□ -0.63
PPFIA1-222	ENST00000532504	MDFI	Q99750	246 aa		11.15	□□□□□ -0.63
PPFIA1-222	ENST00000532504	B9D2	Q9BPU9	175 aa		11.15	□□□□□ -0.63
PPFIA1-222	ENST00000532504	UNC79	Q9P2D8	2635 aa		11.15	□□□□□ -0.63
PPFIA1-222	ENST00000532504	OCIAD2	Q56VL3	154 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	C1orf134	Q5TEV5	83 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IGLV4-69	A0A075B6H9	119 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	HAMP	P81172	84 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	SPATA12	Q7Z6I5	190 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	C11orf72	Q8NBR9	251 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	BAALC-AS2	P0C853	105 aa		11.14	□□□□□ -0.63
PPFIA1-222	ENST00000532504	EYS	Q5T1H1	3165 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504	INAFM2	P0DMQ5	153 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504	COX8C	Q7Z4L0	72 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504		X6R8D5	127 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IGKV2-28	A0A075B6P5	120 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IGKV2D-28	P01615	120 aa		11.13	□□□□□ -0.63
PPFIA1-222	ENST00000532504		A0A1W2PPM0	123 aa		11.12	□□□□□ -0.63
PPFIA1-222	ENST00000532504		H0YGX0	51 aa		11.12	□□□□□ -0.63
PPFIA1-222	ENST00000532504	MRPS36	P82909	103 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-222	ENST00000532504	UBE2D1	P51668	147 aa		11.12	□□□□□ -0.63
PPFIA1-222	ENST00000532504	CELSR3	Q9NYQ7	3312 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IBA57-AS1	B1ANH7	110 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	CHCHD7	Q9BUK0	85 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	COX7B	P24311	80 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	KRTAP10-11	P60412	298 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	ETDB	Q3ZM63	59 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	SPANXC	Q9NY87	97 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	UBE2V1	Q13404	147 aa		11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	MRPL52	Q86TS9	123 aa	Known RBP	11.11	□□□□□ -0.63
PPFIA1-222	ENST00000532504	CYSRT1	A8MQ03	144 aa		11.1	□□□□□ -0.63
PPFIA1-222	ENST00000532504	hADV29S1	A0JD25	119 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	USP17L23	D6RBM5	183 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IGLV5-52	A0A0A0MRZ9	124 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	FRYL	O94915	3013 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	YPEL4	Q96NS1	127 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	LOC107984640	A0A0U1RRK4	108 aa		11.09	□□□□□ -0.63
PPFIA1-222	ENST00000532504	IGKV2D-26	A0A0A0MRZ7	120 aa		11.08	□□□□□ -0.63
PPFIA1-222	ENST00000532504		K7EIL1	84 aa		11.08	□□□□□ -0.63
PPFIA1-222	ENST00000532504	TP73-AS1	Q9UF72	201 aa		11.08	□□□□□ -0.63
PPFIA1-222	ENST00000532504	FOXI1	Q12951	378 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	LINC00242	Q5T6M2	205 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	SPATA3	Q8NHX4	192 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	CLEC2B	Q92478	149 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	DLEU1	O43261	78 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	HIGD1B	Q9P298	99 aa		11.08	□□□□□ -0.64
PPFIA1-222	ENST00000532504	RPL37AP8	A6NKH3	93 aa		11.07	□□□□□ -0.64
PPFIA1-222	ENST00000532504	UBL5	Q9BZL1	73 aa		11.07	□□□□□ -0.64
PPFIA1-222	ENST00000532504	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.07	□□□□□ -0.64
PPFIA1-222	ENST00000532504	ESRG	Q1W209	222 aa		11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	IGIP	A6NJ69	53 aa		11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	MAPKAPK5-AS1	Q8N8E1	139 aa		11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	NTN5	Q8WTR8	489 aa	Predicted RBP	11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	FUS	P35637	526 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	STAB1	Q9NY15	2570 aa		11.06	□□□□□ -0.64
PPFIA1-222	ENST00000532504	MUC7	Q8TAX7	377 aa		11.05	□□□□□ -0.64
PPFIA1-222	ENST00000532504	LINC00308	Q8TCZ7	52 aa		11.05	□□□□□ -0.64
PPFIA1-222	ENST00000532504		K7EP34	96 aa		11.05	□□□□□ -0.64
PPFIA1-222	ENST00000532504	C9orf116	Q5BN46	136 aa	Predicted RBP	11.05	□□□□□ -0.64
PPFIA1-222	ENST00000532504	FRY	Q5TBA9	3013 aa		11.04	□□□□□ -0.64
PPFIA1-222	ENST00000532504	POM121L12	Q8N7R1	296 aa		11.04	□□□□□ -0.64
PPFIA1-222	ENST00000532504	FAM19A4	Q96LR4	140 aa		11.04	□□□□□ -0.64
PPFIA1-222	ENST00000532504		Q8NAQ8	132 aa		11.04	□□□□□ -0.64
PPFIA1-222	ENST00000532504	DNAH14	Q0VDD8	3507 aa		11.03	□□□□□ -0.64
PPFIA1-222	ENST00000532504	COX6A2	Q02221	97 aa		11.03	□□□□□ -0.64
PPFIA1-222	ENST00000532504	C6orf223	Q8N319	242 aa		11.03	□□□□□ -0.64
PPFIA1-222	ENST00000532504	PPDPF	Q9H3Y8	114 aa		11.03	□□□□□ -0.64
PPFIA1-222	ENST00000532504	PTH2	Q96A98	100 aa		11.02	□□□□□ -0.64

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