RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 M0QY20 66 aa11.22□□□□□ -0.61
PKP3-208ENST00000531857 ZNF56Q15929 161 aa11.22□□□□□ -0.61
PKP3-208ENST00000531857 PRO1933Q9H354 126 aa11.22□□□□□ -0.61
PKP3-208ENST00000531857 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
PKP3-208ENST00000531857 A0A087WX48 190 aa11.21□□□□□ -0.61
PKP3-208ENST00000531857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
PKP3-208ENST00000531857 RPL37AP61513 92 aaKnown RBP11.21□□□□□ -0.61
PKP3-208ENST00000531857 FAM74A4Q5TZK3 123 aa11.21□□□□□ -0.61
PKP3-208ENST00000531857 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
PKP3-208ENST00000531857 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
PKP3-208ENST00000531857 A0A087WWL8 130 aa11.2□□□□□ -0.62
PKP3-208ENST00000531857 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
PKP3-208ENST00000531857 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
PKP3-208ENST00000531857 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
PKP3-208ENST00000531857 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
PKP3-208ENST00000531857 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
PKP3-208ENST00000531857 PRSS1P07477 247 aa11.19□□□□□ -0.62
PKP3-208ENST00000531857 NPSP0C0P6 89 aa11.19□□□□□ -0.62
PKP3-208ENST00000531857 Q6ZN92 141 aa11.19□□□□□ -0.62
PKP3-208ENST00000531857 TMEM141Q96I45 108 aa11.19□□□□□ -0.62
PKP3-208ENST00000531857 I3L3M4 83 aa11.18□□□□□ -0.62
PKP3-208ENST00000531857 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
PKP3-208ENST00000531857 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
PKP3-208ENST00000531857 ERASQ7Z444 233 aa11.18□□□□□ -0.62
PKP3-208ENST00000531857 RPL39LQ96EH5 51 aaKnown RBP11.18□□□□□ -0.62
PKP3-208ENST00000531857 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
PKP3-208ENST00000531857 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
PKP3-208ENST00000531857 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
PKP3-208ENST00000531857 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
PKP3-208ENST00000531857 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
PKP3-208ENST00000531857 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
PKP3-208ENST00000531857 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 MT1HL1P0DM35 61 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 UBE2D3P61077 147 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 UBE2D2P62837 147 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 TIMM17AQ99595 171 aa11.16□□□□□ -0.62
PKP3-208ENST00000531857 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
PKP3-208ENST00000531857 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
PKP3-208ENST00000531857 PLNP26678 52 aa11.15□□□□□ -0.62
PKP3-208ENST00000531857 SMAGPQ0VAQ4 97 aa11.15□□□□□ -0.62
PKP3-208ENST00000531857 TRBV7-3A0A075B6L6 115 aa11.14□□□□□ -0.63
PKP3-208ENST00000531857 PANO1I0J062 215 aa11.14□□□□□ -0.63
PKP3-208ENST00000531857 DPM2O94777 84 aa11.14□□□□□ -0.63
PKP3-208ENST00000531857 RPL36AP83881 106 aaKnown RBP11.14□□□□□ -0.63
PKP3-208ENST00000531857 RPL36ALQ969Q0 106 aaKnown RBP11.14□□□□□ -0.63
PKP3-208ENST00000531857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
PKP3-208ENST00000531857 M0R143 59 aa11.13□□□□□ -0.63
PKP3-208ENST00000531857 ODF1Q14990 250 aa11.13□□□□□ -0.63
PKP3-208ENST00000531857 MPV17L2Q567V2 206 aa11.13□□□□□ -0.63
PKP3-208ENST00000531857 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
PKP3-208ENST00000531857 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
PKP3-208ENST00000531857 H0Y8G0 127 aa11.12□□□□□ -0.63
PKP3-208ENST00000531857 IGKCP01834 107 aa11.12□□□□□ -0.63
PKP3-208ENST00000531857 CRPP02741 224 aa11.12□□□□□ -0.63
PKP3-208ENST00000531857 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
PKP3-208ENST00000531857 F8VRH5 84 aa11.11□□□□□ -0.63
PKP3-208ENST00000531857 DLEU1O43261 78 aa11.11□□□□□ -0.63
PKP3-208ENST00000531857 ANGP03950 147 aaKnown RBP11.11□□□□□ -0.63
PKP3-208ENST00000531857 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
PKP3-208ENST00000531857 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
PKP3-208ENST00000531857 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
PKP3-208ENST00000531857 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
PKP3-208ENST00000531857 COX8AP10176 69 aa11.09□□□□□ -0.63
PKP3-208ENST00000531857 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
PKP3-208ENST00000531857 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
PKP3-208ENST00000531857 PMVKQ15126 192 aa11.08□□□□□ -0.64
PKP3-208ENST00000531857 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
PKP3-208ENST00000531857 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
PKP3-208ENST00000531857 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
PKP3-208ENST00000531857 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
PKP3-208ENST00000531857 TSHBP01222 138 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 MIAQ16674 131 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
PKP3-208ENST00000531857 hDV102S1A0JD36 115 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 CTAG1AP78358 180 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 COTL1Q14019 142 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 Q6ZRU5 148 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
PKP3-208ENST00000531857 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
PKP3-208ENST00000531857 PRR34Q9NV39 138 aa11.05□□□□□ -0.64
PKP3-208ENST00000531857 MAJINQ3KP22 176 aa11.04□□□□□ -0.64
PKP3-208ENST00000531857 LINC00269Q8N2A0 174 aa11.04□□□□□ -0.64
PKP3-208ENST00000531857 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
PKP3-208ENST00000531857 HERVK_113P61574 105 aa11.03□□□□□ -0.64
PKP3-208ENST00000531857 RBX1P62877 108 aa11.03□□□□□ -0.64
PKP3-208ENST00000531857 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
PKP3-208ENST00000531857 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
PKP3-208ENST00000531857 H7C423 109 aa11.02□□□□□ -0.65
PKP3-208ENST00000531857 GAGE6Q13070 117 aa11.02□□□□□ -0.65
PKP3-208ENST00000531857 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
PKP3-208ENST00000531857 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
PKP3-208ENST00000531857 VCX2Q9H322 139 aa11.01□□□□□ -0.65
PKP3-208ENST00000531857 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
PKP3-208ENST00000531857 CHTF8P0CG12 524 aa11□□□□□ -0.65
PKP3-208ENST00000531857 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms