RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 REG3GQ6UW15 175 aa12.5□□□□□ -0.41
HIPK3-205ENST00000531504 CLPSL2Q6UWE3 100 aa12.5□□□□□ -0.41
HIPK3-205ENST00000531504 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
HIPK3-205ENST00000531504 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
HIPK3-205ENST00000531504 NDUFA6P56556 154 aa12.49□□□□□ -0.41
HIPK3-205ENST00000531504 KRTAP26-1Q6PEX3 210 aa12.49□□□□□ -0.41
HIPK3-205ENST00000531504 SERF1AO75920 110 aa12.48□□□□□ -0.41
HIPK3-205ENST00000531504 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
HIPK3-205ENST00000531504 COA6Q5JTJ3 125 aaKnown RBP12.48□□□□□ -0.41
HIPK3-205ENST00000531504 LINC00269Q8N2A0 174 aa12.48□□□□□ -0.41
HIPK3-205ENST00000531504 ESDP10768 282 aa12.47□□□□□ -0.41
HIPK3-205ENST00000531504 LINC00310P59036 64 aa12.47□□□□□ -0.41
HIPK3-205ENST00000531504 KRTAP10-8P60410 259 aa12.47□□□□□ -0.41
HIPK3-205ENST00000531504 TMEM243Q9BU79 118 aa12.47□□□□□ -0.41
HIPK3-205ENST00000531504 G0S2P27469 103 aa12.46□□□□□ -0.41
HIPK3-205ENST00000531504 RBX1P62877 108 aa12.46□□□□□ -0.41
HIPK3-205ENST00000531504 HSBP1O75506 76 aa12.45□□□□□ -0.42
HIPK3-205ENST00000531504 C20orf203Q8NBC4 194 aa12.45□□□□□ -0.42
HIPK3-205ENST00000531504 H7C423 109 aa12.44□□□□□ -0.42
HIPK3-205ENST00000531504 NUPR1O60356 82 aa12.44□□□□□ -0.42
HIPK3-205ENST00000531504 S100A6P06703 90 aa12.44□□□□□ -0.42
HIPK3-205ENST00000531504 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
HIPK3-205ENST00000531504 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
HIPK3-205ENST00000531504 IGLV10-54A0A075B6I4 117 aa12.43□□□□□ -0.42
HIPK3-205ENST00000531504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.42□□□□□ -0.42
HIPK3-205ENST00000531504 TRAV8-4A0A0B4J246 113 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 IGKV2-29A2NJV5 120 aaPredicted RBP12.42□□□□□ -0.42
HIPK3-205ENST00000531504 UBE2L6O14933 153 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 REG3AQ06141 175 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 GAGE6Q13070 117 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 CYSLTR1Q9Y271 337 aa12.42□□□□□ -0.42
HIPK3-205ENST00000531504 LINC01549A6NIU2 74 aa12.41□□□□□ -0.42
HIPK3-205ENST00000531504 HBDP02042 147 aa12.41□□□□□ -0.42
HIPK3-205ENST00000531504 PMCHL1Q16048 86 aa12.41□□□□□ -0.42
HIPK3-205ENST00000531504 TMA7Q9Y2S6 64 aaKnown RBP12.41□□□□□ -0.42
HIPK3-205ENST00000531504 A0A096LNJ9 63 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 SLPIP03973 132 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
HIPK3-205ENST00000531504 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 KRTAP9-2Q9BYQ4 174 aa12.4□□□□□ -0.42
HIPK3-205ENST00000531504 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
HIPK3-205ENST00000531504 FGF6P10767 208 aa12.38□□□□□ -0.43
HIPK3-205ENST00000531504 COX6A2Q02221 97 aa12.38□□□□□ -0.43
HIPK3-205ENST00000531504 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
HIPK3-205ENST00000531504 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
HIPK3-205ENST00000531504 TIMM21Q9BVV7 248 aa12.38□□□□□ -0.43
HIPK3-205ENST00000531504 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
HIPK3-205ENST00000531504 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
HIPK3-205ENST00000531504 PDZD11Q5EBL8 140 aa12.37□□□□□ -0.43
HIPK3-205ENST00000531504 STPG4Q8N801 248 aa12.37□□□□□ -0.43
HIPK3-205ENST00000531504 UBE2D4Q9Y2X8 147 aa12.37□□□□□ -0.43
HIPK3-205ENST00000531504 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
HIPK3-205ENST00000531504 IGKV2-24A0A0C4DH68 120 aa12.36□□□□□ -0.43
HIPK3-205ENST00000531504 C5orf52A6NGY3 159 aa12.36□□□□□ -0.43
HIPK3-205ENST00000531504 SNRPEP62304 92 aaKnown RBP12.36□□□□□ -0.43
HIPK3-205ENST00000531504 SCGB3A1Q96QR1 104 aa12.36□□□□□ -0.43
HIPK3-205ENST00000531504 CSDC2Q9Y534 153 aaKnown RBP12.36□□□□□ -0.43
HIPK3-205ENST00000531504 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
HIPK3-205ENST00000531504 ERASQ7Z444 233 aa12.35□□□□□ -0.43
HIPK3-205ENST00000531504 HIST3H2BBQ8N257 126 aa12.35□□□□□ -0.43
HIPK3-205ENST00000531504 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
HIPK3-205ENST00000531504 TIMM17AQ99595 171 aa12.35□□□□□ -0.43
HIPK3-205ENST00000531504 IGIPA6NJ69 53 aa12.34□□□□□ -0.43
HIPK3-205ENST00000531504 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
HIPK3-205ENST00000531504 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
HIPK3-205ENST00000531504 ATP5LO75964 103 aa12.33□□□□□ -0.44
HIPK3-205ENST00000531504 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
HIPK3-205ENST00000531504 NPSP0C0P6 89 aa12.33□□□□□ -0.44
HIPK3-205ENST00000531504 S100A2P29034 98 aa12.33□□□□□ -0.44
HIPK3-205ENST00000531504 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
HIPK3-205ENST00000531504 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-205ENST00000531504 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
HIPK3-205ENST00000531504 HSPB8Q9UJY1 196 aa12.32□□□□□ -0.44
HIPK3-205ENST00000531504 LPAP08519 4548 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.31□□□□□ -0.44
HIPK3-205ENST00000531504 FABP4P15090 132 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 LINC00474Q9P2X8 69 aa12.31□□□□□ -0.44
HIPK3-205ENST00000531504 SRSF9Q13242 221 aaKnown RBP eCLIP12.3□□□□□ -0.44
HIPK3-205ENST00000531504 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 Q6ZRP5 223 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 Q6ZUT4 128 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
HIPK3-205ENST00000531504 PKIGQ9Y2B9 76 aa12.3□□□□□ -0.44
HIPK3-205ENST00000531504 Q6ZN92 141 aa12.29□□□□□ -0.44
HIPK3-205ENST00000531504 LINC00173Q6ZV60 143 aa12.29□□□□□ -0.44
HIPK3-205ENST00000531504 FAM104AQ969W3 186 aa12.29□□□□□ -0.44
HIPK3-205ENST00000531504 IFI27L1Q96BM0 104 aa12.29□□□□□ -0.44
HIPK3-205ENST00000531504 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
HIPK3-205ENST00000531504 VCX2Q9H322 139 aa12.27□□□□□ -0.45
HIPK3-205ENST00000531504 A0A096LNI7 61 aa12.26□□□□□ -0.45
HIPK3-205ENST00000531504 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms