RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RMI2Q96E14 147 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 DPM2O94777 84 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 SEC11AP67812 179 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 C5orf38Q86SI9 138 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 LINC00469Q8N7U9 141 aa12.72□□□□□ -0.37
SMPD1-205ENST00000531303 HERVK_113P63121 156 aa12.71□□□□□ -0.38
SMPD1-205ENST00000531303 CD164L2Q6UWJ8 174 aa12.71□□□□□ -0.38
SMPD1-205ENST00000531303 ATOH7Q8N100 152 aa12.71□□□□□ -0.38
SMPD1-205ENST00000531303 IGKCP01834 107 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 FOXI1Q12951 378 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 KRTAP26-1Q6PEX3 210 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
SMPD1-205ENST00000531303 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
SMPD1-205ENST00000531303 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
SMPD1-205ENST00000531303 PLNP26678 52 aa12.69□□□□□ -0.38
SMPD1-205ENST00000531303 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
SMPD1-205ENST00000531303 PSCAO43653 123 aa12.68□□□□□ -0.38
SMPD1-205ENST00000531303 ZNF22P17026 224 aaPredicted RBP12.68□□□□□ -0.38
SMPD1-205ENST00000531303 C6orf223Q8N319 242 aa12.68□□□□□ -0.38
SMPD1-205ENST00000531303 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
SMPD1-205ENST00000531303 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
SMPD1-205ENST00000531303 COX7A2LO14548 114 aa12.67□□□□□ -0.38
SMPD1-205ENST00000531303 C1orf134Q5TEV5 83 aa12.67□□□□□ -0.38
SMPD1-205ENST00000531303 DNAH6Q9C0G6 4158 aa12.67□□□□□ -0.38
SMPD1-205ENST00000531303 HYDINQ4G0P3 5121 aa12.66□□□□□ -0.38
SMPD1-205ENST00000531303 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
SMPD1-205ENST00000531303 MALP21145 153 aa12.65□□□□□ -0.38
SMPD1-205ENST00000531303 MAPKAPK5-AS1Q8N8E1 139 aa12.65□□□□□ -0.38
SMPD1-205ENST00000531303 COX11Q9Y6N1 276 aa12.65□□□□□ -0.38
SMPD1-205ENST00000531303 JOSD1Q15040 202 aaPredicted RBP12.65□□□□□ -0.38
SMPD1-205ENST00000531303 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
SMPD1-205ENST00000531303 IGLV5-45A0A087WSX0 123 aa12.64□□□□□ -0.39
SMPD1-205ENST00000531303 H3BRM9 83 aa12.64□□□□□ -0.39
SMPD1-205ENST00000531303 LECT2O14960 151 aa12.64□□□□□ -0.39
SMPD1-205ENST00000531303 A0A087WZ39 114 aa12.63□□□□□ -0.39
SMPD1-205ENST00000531303 PYY3Q5JQD4 70 aa12.63□□□□□ -0.39
SMPD1-205ENST00000531303 Q6ZRN7 208 aaPredicted RBP12.63□□□□□ -0.39
SMPD1-205ENST00000531303 STPG4Q8N801 248 aa12.63□□□□□ -0.39
SMPD1-205ENST00000531303 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
SMPD1-205ENST00000531303 DNAH10Q8IVF4 4471 aa12.61□□□□□ -0.39
SMPD1-205ENST00000531303 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
SMPD1-205ENST00000531303 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
SMPD1-205ENST00000531303 SMIM1B2RUZ4 78 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 APOMO95445 188 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 HIGD2BQ4VC39 106 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 ORAOV1Q8WV07 137 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 TOMM7Q9P0U1 55 aa12.59□□□□□ -0.39
SMPD1-205ENST00000531303 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
SMPD1-205ENST00000531303 HERVK_113P61574 105 aa12.58□□□□□ -0.4
SMPD1-205ENST00000531303 WFDC2Q14508 124 aa12.58□□□□□ -0.4
SMPD1-205ENST00000531303 CDPF1Q6NVV7 123 aa12.58□□□□□ -0.4
SMPD1-205ENST00000531303 KMT2CQ8NEZ4 4911 aaKnown RBP12.58□□□□□ -0.4
SMPD1-205ENST00000531303 CFAP161Q6P656 301 aa12.57□□□□□ -0.4
SMPD1-205ENST00000531303 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
SMPD1-205ENST00000531303 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
SMPD1-205ENST00000531303 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
SMPD1-205ENST00000531303 HSBP1L1C9JCN9 74 aa12.56□□□□□ -0.4
SMPD1-205ENST00000531303 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
SMPD1-205ENST00000531303 RTL8CO15255 209 aa12.55□□□□□ -0.4
SMPD1-205ENST00000531303 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
SMPD1-205ENST00000531303 RYR2Q92736 4967 aa12.55□□□□□ -0.4
SMPD1-205ENST00000531303 SPAG11BQ08648 103 aa12.54□□□□□ -0.4
SMPD1-205ENST00000531303 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
SMPD1-205ENST00000531303 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
SMPD1-205ENST00000531303 PRSS2P07478 247 aa12.53□□□□□ -0.4
SMPD1-205ENST00000531303 COX7B2Q8TF08 81 aa12.53□□□□□ -0.4
SMPD1-205ENST00000531303 IGKV2D-26A0A0A0MRZ7 120 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 E9PLD3 99 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 ZNF561-AS1K7EIQ3 104 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 LEPROTO15243 131 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 TNP2Q05952 138 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 C6orf226Q5I0X4 101 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 VAMP8Q9BV40 100 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.41
SMPD1-205ENST00000531303 A0A087WTM6 91 aa12.51□□□□□ -0.41
SMPD1-205ENST00000531303 NMUP48645 174 aa12.51□□□□□ -0.41
SMPD1-205ENST00000531303 TSPEAR-AS2P59090 65 aa12.51□□□□□ -0.41
SMPD1-205ENST00000531303 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
SMPD1-205ENST00000531303 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
SMPD1-205ENST00000531303 KIAA0087Q14695 138 aa12.5□□□□□ -0.41
SMPD1-205ENST00000531303 J3QQQ9 107 aa12.49□□□□□ -0.41
SMPD1-205ENST00000531303 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
SMPD1-205ENST00000531303 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
SMPD1-205ENST00000531303 Q8IZM0 81 aa12.49□□□□□ -0.41
SMPD1-205ENST00000531303 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-205ENST00000531303 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
SMPD1-205ENST00000531303 CKS1BP61024 79 aa12.48□□□□□ -0.41
SMPD1-205ENST00000531303 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
SMPD1-205ENST00000531303 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
SMPD1-205ENST00000531303 DNAH17Q9UFH2 4485 aa12.48□□□□□ -0.41
SMPD1-205ENST00000531303 C14orf177Q52M58 125 aa12.47□□□□□ -0.41
SMPD1-205ENST00000531303 NTN5Q8WTR8 489 aaPredicted RBP12.46□□□□□ -0.41
SMPD1-205ENST00000531303 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.41
SMPD1-205ENST00000531303 S100A12P80511 92 aa12.46□□□□□ -0.42
SMPD1-205ENST00000531303 UNQ6190/PRO20217Q6UXQ8 127 aa12.46□□□□□ -0.42
SMPD1-205ENST00000531303 Q8N814 137 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms