RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
GSDMD-210ENST00000531173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.71□□□□□ -0.69
GSDMD-210ENST00000531173 A0A1B0GUV1 79 aa10.71□□□□□ -0.69
GSDMD-210ENST00000531173 IGKV2-29A2NJV5 120 aaPredicted RBP10.71□□□□□ -0.69
GSDMD-210ENST00000531173 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
GSDMD-210ENST00000531173 REG3AQ06141 175 aa10.71□□□□□ -0.69
GSDMD-210ENST00000531173 PDZD11Q5EBL8 140 aa10.71□□□□□ -0.69
GSDMD-210ENST00000531173 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
GSDMD-210ENST00000531173 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
GSDMD-210ENST00000531173 TIMM21Q9BVV7 248 aa10.71□□□□□ -0.69
GSDMD-210ENST00000531173 IGLV4-60A0A075B6I1 120 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 UBE2L6O14933 153 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 PYGO1Q9Y3Y4 419 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
GSDMD-210ENST00000531173 HMCN2Q8NDA2 5059 aa10.7□□□□□ -0.7
GSDMD-210ENST00000531173 NPSP0C0P6 89 aa10.69□□□□□ -0.7
GSDMD-210ENST00000531173 ZNF25P17030 456 aaPredicted RBP10.69□□□□□ -0.7
GSDMD-210ENST00000531173 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
GSDMD-210ENST00000531173 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
GSDMD-210ENST00000531173 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
GSDMD-210ENST00000531173 IGIPA6NJ69 53 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 PANO1I0J062 215 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 J3QL48 77 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 FGF6P10767 208 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 SDIM1Q6ZPB5 146 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 ERASQ7Z444 233 aa10.68□□□□□ -0.7
GSDMD-210ENST00000531173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
GSDMD-210ENST00000531173 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
GSDMD-210ENST00000531173 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
GSDMD-210ENST00000531173 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
GSDMD-210ENST00000531173 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 IFITM10A6NMD0 228 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 S100A2P29034 98 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
GSDMD-210ENST00000531173 FAM104AQ969W3 186 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 SCGB3A1Q96QR1 104 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
GSDMD-210ENST00000531173 ATP5LO75964 103 aa10.65□□□□□ -0.7
GSDMD-210ENST00000531173 SLPIP03973 132 aa10.65□□□□□ -0.7
GSDMD-210ENST00000531173 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.7
GSDMD-210ENST00000531173 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.7
GSDMD-210ENST00000531173 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
GSDMD-210ENST00000531173 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
GSDMD-210ENST00000531173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.63□□□□□ -0.71
GSDMD-210ENST00000531173 FABP4P15090 132 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 HNRNPA3P51991 378 aaKnown RBP10.63□□□□□ -0.71
GSDMD-210ENST00000531173 LINC00173Q6ZV60 143 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
GSDMD-210ENST00000531173 Q6ZUT4 128 aa10.62□□□□□ -0.71
GSDMD-210ENST00000531173 OXTP01178 125 aa10.61□□□□□ -0.71
GSDMD-210ENST00000531173 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
GSDMD-210ENST00000531173 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
GSDMD-210ENST00000531173 AMELXQ99217 191 aa10.61□□□□□ -0.71
GSDMD-210ENST00000531173 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
GSDMD-210ENST00000531173 hDV102S1A0JD36 115 aa10.6□□□□□ -0.71
GSDMD-210ENST00000531173 Q6ZN92 141 aa10.6□□□□□ -0.71
GSDMD-210ENST00000531173 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
GSDMD-210ENST00000531173 RPL37AP61513 92 aaKnown RBP10.59□□□□□ -0.71
GSDMD-210ENST00000531173 MAP1LC3CQ9BXW4 147 aa10.59□□□□□ -0.71
GSDMD-210ENST00000531173 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
GSDMD-210ENST00000531173 PMVKQ15126 192 aa10.58□□□□□ -0.72
GSDMD-210ENST00000531173 TEX43Q6ZNM6 134 aa10.58□□□□□ -0.72
GSDMD-210ENST00000531173 VCX2Q9H322 139 aa10.58□□□□□ -0.72
GSDMD-210ENST00000531173 SYS1-DBNDD2H3BUS1 97 aa10.57□□□□□ -0.72
GSDMD-210ENST00000531173 C3orf79P0CE67 100 aa10.57□□□□□ -0.72
GSDMD-210ENST00000531173 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
GSDMD-210ENST00000531173 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
GSDMD-210ENST00000531173 CHTF8P0CG12 524 aa10.56□□□□□ -0.72
GSDMD-210ENST00000531173 C2orf88Q9BSF0 95 aa10.56□□□□□ -0.72
GSDMD-210ENST00000531173 CST9LQ9H4G1 147 aa10.56□□□□□ -0.72
GSDMD-210ENST00000531173 UBR4Q5T4S7 5183 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 FAM19A3Q7Z5A8 133 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 OR10D4PQ8NGN7 298 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
GSDMD-210ENST00000531173 CCL25O15444 150 aa10.54□□□□□ -0.72
GSDMD-210ENST00000531173 UBE2D1P51668 147 aa10.54□□□□□ -0.72
GSDMD-210ENST00000531173 KRTDAPP60985 99 aa10.54□□□□□ -0.72
GSDMD-210ENST00000531173 ODF1Q14990 250 aa10.54□□□□□ -0.72
GSDMD-210ENST00000531173 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
GSDMD-210ENST00000531173 A0A087WYN8 130 aa10.53□□□□□ -0.72
GSDMD-210ENST00000531173 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
GSDMD-210ENST00000531173 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
GSDMD-210ENST00000531173 TNXBP22105 4242 aa10.53□□□□□ -0.72
GSDMD-210ENST00000531173 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
GSDMD-210ENST00000531173 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
GSDMD-210ENST00000531173 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
GSDMD-210ENST00000531173 F8VRH5 84 aa10.52□□□□□ -0.73
GSDMD-210ENST00000531173 FOXI1Q12951 378 aa10.52□□□□□ -0.73
GSDMD-210ENST00000531173 PLAC8Q9NZF1 115 aa10.52□□□□□ -0.73
GSDMD-210ENST00000531173 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
GSDMD-210ENST00000531173 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms