RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
CPSF1-205ENST00000531042 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
CPSF1-205ENST00000531042 Q6ZRP5 223 aa9.8□□□□□ -0.84
CPSF1-205ENST00000531042 A0A1B0GW15 77 aa9.79□□□□□ -0.84
CPSF1-205ENST00000531042 RPL32P62910 135 aaKnown RBP9.79□□□□□ -0.84
CPSF1-205ENST00000531042 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
CPSF1-205ENST00000531042 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
CPSF1-205ENST00000531042 C2orf48Q96LS8 159 aa9.79□□□□□ -0.84
CPSF1-205ENST00000531042 CAMK2N2Q96S95 79 aa9.79□□□□□ -0.84
CPSF1-205ENST00000531042 TNFRSF6BO95407 300 aa9.78□□□□□ -0.84
CPSF1-205ENST00000531042 APOMO95445 188 aa9.78□□□□□ -0.84
CPSF1-205ENST00000531042 CKS2P33552 79 aa9.78□□□□□ -0.84
CPSF1-205ENST00000531042 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 TCAPO15273 167 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
CPSF1-205ENST00000531042 REG3GQ6UW15 175 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
CPSF1-205ENST00000531042 COLCA2A8K830 154 aa9.76□□□□□ -0.85
CPSF1-205ENST00000531042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-205ENST00000531042 MT-ND4LP03901 98 aa9.76□□□□□ -0.85
CPSF1-205ENST00000531042 SMIM2Q9BVW6 85 aa9.76□□□□□ -0.85
CPSF1-205ENST00000531042 D6R8Y8 96 aa9.75□□□□□ -0.85
CPSF1-205ENST00000531042 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
CPSF1-205ENST00000531042 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
CPSF1-205ENST00000531042 ODF1Q14990 250 aa9.75□□□□□ -0.85
CPSF1-205ENST00000531042 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
CPSF1-205ENST00000531042 LRP2P98164 4655 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 NPYP01303 97 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 S100A8P05109 93 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 HBBP68871 147 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-205ENST00000531042 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 YPEL4Q96NS1 127 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-205ENST00000531042 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
CPSF1-205ENST00000531042 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
CPSF1-205ENST00000531042 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
CPSF1-205ENST00000531042 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
CPSF1-205ENST00000531042 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
CPSF1-205ENST00000531042 PPBPP02775 128 aa9.72□□□□□ -0.85
CPSF1-205ENST00000531042 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
CPSF1-205ENST00000531042 F8WDY8 70 aa9.71□□□□□ -0.86
CPSF1-205ENST00000531042 RAB5AP20339 215 aa9.71□□□□□ -0.86
CPSF1-205ENST00000531042 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
CPSF1-205ENST00000531042 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
CPSF1-205ENST00000531042 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
CPSF1-205ENST00000531042 LOC105371267A0A1B0GV96 52 aa9.69□□□□□ -0.86
CPSF1-205ENST00000531042 IFITM10A6NMD0 228 aa9.69□□□□□ -0.86
CPSF1-205ENST00000531042 NDUFA1O15239 70 aa9.69□□□□□ -0.86
CPSF1-205ENST00000531042 MT-ND6P03923 174 aa9.69□□□□□ -0.86
CPSF1-205ENST00000531042 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
CPSF1-205ENST00000531042 S100PP25815 95 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 RAB5BP61020 215 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 TMEM136Q6ZRR5 245 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 ATP5L2Q7Z4Y8 100 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
CPSF1-205ENST00000531042 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
CPSF1-205ENST00000531042 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-205ENST00000531042 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
CPSF1-205ENST00000531042 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
CPSF1-205ENST00000531042 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
CPSF1-205ENST00000531042 C1orf137Q5JT78 98 aa9.66□□□□□ -0.86
CPSF1-205ENST00000531042 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
CPSF1-205ENST00000531042 RNF213Q63HN8 5207 aa9.65□□□□□ -0.86
CPSF1-205ENST00000531042 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
CPSF1-205ENST00000531042 A0A087WZ39 114 aa9.65□□□□□ -0.86
CPSF1-205ENST00000531042 PRSS47A8MTI9 375 aa9.65□□□□□ -0.86
CPSF1-205ENST00000531042 KIAA0087Q14695 138 aa9.65□□□□□ -0.86
CPSF1-205ENST00000531042 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
CPSF1-205ENST00000531042 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CPSF1-205ENST00000531042 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
CPSF1-205ENST00000531042 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
CPSF1-205ENST00000531042 LAMTOR2Q9Y2Q5 125 aa9.63□□□□□ -0.87
CPSF1-205ENST00000531042 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
CPSF1-205ENST00000531042 IGLV7-43P04211 117 aa9.62□□□□□ -0.87
CPSF1-205ENST00000531042 KRTAP11-1Q8IUC1 163 aa9.62□□□□□ -0.87
CPSF1-205ENST00000531042 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
CPSF1-205ENST00000531042 TEX43Q6ZNM6 134 aa9.61□□□□□ -0.87
CPSF1-205ENST00000531042 FAM19A5Q7Z5A7 132 aaPredicted RBP9.61□□□□□ -0.87
CPSF1-205ENST00000531042 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
CPSF1-205ENST00000531042 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
CPSF1-205ENST00000531042 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
CPSF1-205ENST00000531042 UBE2D1P51668 147 aa9.6□□□□□ -0.87
CPSF1-205ENST00000531042 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
CPSF1-205ENST00000531042 Q8N8P6 123 aa9.6□□□□□ -0.87
CPSF1-205ENST00000531042 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
CPSF1-205ENST00000531042 C2orf82Q6UX34 121 aa9.59□□□□□ -0.87
CPSF1-205ENST00000531042 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.87
CPSF1-205ENST00000531042 LINC01561Q8N1V8 128 aa9.59□□□□□ -0.87
CPSF1-205ENST00000531042 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
CPSF1-205ENST00000531042 S100A6P06703 90 aa9.58□□□□□ -0.88
CPSF1-205ENST00000531042 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
CPSF1-205ENST00000531042 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
CPSF1-205ENST00000531042 AMELXQ99217 191 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms