RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
CCS-206ENST00000530961 MALP21145 153 aa9.99□□□□□ -0.81
CCS-206ENST00000530961 GCSHP23434 173 aa9.99□□□□□ -0.81
CCS-206ENST00000530961 FUSP35637 526 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCS-206ENST00000530961 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
CCS-206ENST00000530961 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 HSBP1O75506 76 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 SEC11AP67812 179 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 Q8N1X5 172 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
CCS-206ENST00000530961 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
CCS-206ENST00000530961 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 ATP5LO75964 103 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 APOMO95445 188 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
CCS-206ENST00000530961 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 PDZD11Q5EBL8 140 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
CCS-206ENST00000530961 PMVKQ15126 192 aa9.96□□□□□ -0.82
CCS-206ENST00000530961 CST9LQ9H4G1 147 aa9.96□□□□□ -0.82
CCS-206ENST00000530961 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
CCS-206ENST00000530961 HERVK_113P63121 156 aa9.95□□□□□ -0.82
CCS-206ENST00000530961 A0A087WZ39 114 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 SERF1AO75920 110 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 KRTAP10-1P60331 282 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 COX6A2Q02221 97 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 GEMIN7Q9H840 131 aaKnown RBP9.94□□□□□ -0.82
CCS-206ENST00000530961 LRP1BQ9NZR2 4599 aa9.94□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BKO60814 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BJP06899 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BOP23527 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BBP33778 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BDP58876 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BCP62807 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST2H2BEQ16778 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.93□□□□□ -0.82
CCS-206ENST00000530961 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BHQ93079 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BNQ99877 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 HIST1H2BMQ99879 126 aa9.93□□□□□ -0.82
CCS-206ENST00000530961 SRRM2Q9UQ35 2752 aaKnown RBP9.93□□□□□ -0.82
CCS-206ENST00000530961 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
CCS-206ENST00000530961 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
CCS-206ENST00000530961 SLPIP03973 132 aa9.92□□□□□ -0.82
CCS-206ENST00000530961 OR10D4PQ8NGN7 298 aa9.92□□□□□ -0.82
CCS-206ENST00000530961 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
CCS-206ENST00000530961 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
CCS-206ENST00000530961 NDUFA6P56556 154 aa9.91□□□□□ -0.82
CCS-206ENST00000530961 LINC00310P59036 64 aa9.91□□□□□ -0.82
CCS-206ENST00000530961 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
CCS-206ENST00000530961 F8WDY8 70 aa9.9□□□□□ -0.82
CCS-206ENST00000530961 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
CCS-206ENST00000530961 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
CCS-206ENST00000530961 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
CCS-206ENST00000530961 NUPR1O60356 82 aa9.89□□□□□ -0.83
CCS-206ENST00000530961 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
CCS-206ENST00000530961 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
CCS-206ENST00000530961 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
CCS-206ENST00000530961 IGLV5-45A0A087WSX0 123 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 LINC01620Q4KN68 170 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 PACRGQ96M98 296 aaPredicted RBP9.88□□□□□ -0.83
CCS-206ENST00000530961 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
CCS-206ENST00000530961 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
CCS-206ENST00000530961 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
CCS-206ENST00000530961 LINC00526Q96FQ7 95 aa9.87□□□□□ -0.83
CCS-206ENST00000530961 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
CCS-206ENST00000530961 H3BRM9 83 aa9.86□□□□□ -0.83
CCS-206ENST00000530961 COA6Q5JTJ3 125 aaKnown RBP9.86□□□□□ -0.83
CCS-206ENST00000530961 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
CCS-206ENST00000530961 Q6ZSA8 131 aa9.86□□□□□ -0.83
CCS-206ENST00000530961 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
CCS-206ENST00000530961 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
CCS-206ENST00000530961 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
CCS-206ENST00000530961 PRSS2P07478 247 aa9.84□□□□□ -0.83
CCS-206ENST00000530961 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
CCS-206ENST00000530961 CHAC1Q9BUX1 264 aa9.84□□□□□ -0.83
CCS-206ENST00000530961 FAM30AQ9NZY2 134 aa9.84□□□□□ -0.83
CCS-206ENST00000530961 NDUFA1O15239 70 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 FABP4P15090 132 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 XGP55808 180 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 Q6ZRU5 148 aa9.83□□□□□ -0.84
CCS-206ENST00000530961 MRPL35Q9NZE8 188 aaKnown RBP9.83□□□□□ -0.84
CCS-206ENST00000530961 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
CCS-206ENST00000530961 F8VRH5 84 aa9.82□□□□□ -0.84
CCS-206ENST00000530961 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
CCS-206ENST00000530961 Q8IZM0 81 aa9.82□□□□□ -0.84
CCS-206ENST00000530961 ZNF22P17026 224 aaPredicted RBP9.81□□□□□ -0.84
CCS-206ENST00000530961 MAP1LC3CQ9BXW4 147 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms