RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TRAV8-4A0A0B4J246 113 aa16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 DPM2O94777 84 aa16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 JOSD1Q15040 202 aaPredicted RBP16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 KRTAP26-1Q6PEX3 210 aa16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 NFE4Q86UQ8 179 aa16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 CDKN2A-AS1Q9UH64 79 aa16.51■□□□□ 0.23
LDLRAD3-203ENST00000528989 IGKCP01834 107 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 TTC32Q5I0X7 151 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 IGHV3OR16-9A0A0B4J2B5 98 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 C20orf202A1L168 122 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 GAGE12HA6NDE8 117 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 Q6ZR54 194 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 C1orf43Q9BWL3 253 aa16.5■□□□□ 0.23
LDLRAD3-203ENST00000528989 C5orf38Q86SI9 138 aa16.49■□□□□ 0.23
LDLRAD3-203ENST00000528989 LINC00469Q8N7U9 141 aa16.49■□□□□ 0.23
LDLRAD3-203ENST00000528989 ZNF22P17026 224 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 PLNP26678 52 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 HERVK_113P63121 156 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 FOXI1Q12951 378 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 TMEM170BQ5T4T1 132 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 CD164L2Q6UWJ8 174 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 CDPF1Q6NVV7 123 aa16.48■□□□□ 0.23
LDLRAD3-203ENST00000528989 SEC11AP67812 179 aa16.47■□□□□ 0.23
LDLRAD3-203ENST00000528989 DNAH2Q9P225 4427 aa16.46■□□□□ 0.23
LDLRAD3-203ENST00000528989 MAJINQ3KP22 176 aa16.46■□□□□ 0.23
LDLRAD3-203ENST00000528989 MAPKAPK5-AS1Q8N8E1 139 aa16.46■□□□□ 0.23
LDLRAD3-203ENST00000528989 KMT2CQ8NEZ4 4911 aaKnown RBP16.46■□□□□ 0.23
LDLRAD3-203ENST00000528989 STPG4Q8N801 248 aa16.46■□□□□ 0.22
LDLRAD3-203ENST00000528989 IGLV5-45A0A087WSX0 123 aa16.45■□□□□ 0.22
LDLRAD3-203ENST00000528989 LCE6AA0A183 80 aa16.44■□□□□ 0.22
LDLRAD3-203ENST00000528989 hDV102S1A0JD36 115 aa16.43■□□□□ 0.22
LDLRAD3-203ENST00000528989 SPINK8P0C7L1 97 aa16.42■□□□□ 0.22
LDLRAD3-203ENST00000528989 DNAH6Q9C0G6 4158 aa16.42■□□□□ 0.22
LDLRAD3-203ENST00000528989 IGHV3-64A0A075B6Q5 118 aa16.42■□□□□ 0.22
LDLRAD3-203ENST00000528989 A0A087WZ39 114 aa16.41■□□□□ 0.22
LDLRAD3-203ENST00000528989 COX7A2LO14548 114 aa16.4■□□□□ 0.22
LDLRAD3-203ENST00000528989 RMI2Q96E14 147 aa16.39■□□□□ 0.22
LDLRAD3-203ENST00000528989 TMEM223A0PJW6 202 aa16.39■□□□□ 0.21
LDLRAD3-203ENST00000528989 Q6ZRN7 208 aaPredicted RBP16.39■□□□□ 0.21
LDLRAD3-203ENST00000528989 SMIM1B2RUZ4 78 aa16.37■□□□□ 0.21
LDLRAD3-203ENST00000528989 C6orf223Q8N319 242 aa16.37■□□□□ 0.21
LDLRAD3-203ENST00000528989 H3BRM9 83 aa16.37■□□□□ 0.21
LDLRAD3-203ENST00000528989 MALP21145 153 aa16.37■□□□□ 0.21
LDLRAD3-203ENST00000528989 LECT2O14960 151 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 TM2D2Q9BX73 214 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 COX11Q9Y6N1 276 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 PSCAO43653 123 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 ANKRD39Q53RE8 183 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 C1orf134Q5TEV5 83 aa16.35■□□□□ 0.21
LDLRAD3-203ENST00000528989 IGKV2D-26A0A0A0MRZ7 120 aa16.33■□□□□ 0.2
LDLRAD3-203ENST00000528989 WFDC2Q14508 124 aa16.33■□□□□ 0.2
LDLRAD3-203ENST00000528989 LINC00526Q96FQ7 95 aa16.32■□□□□ 0.2
LDLRAD3-203ENST00000528989 PAM16Q9Y3D7 125 aa16.32■□□□□ 0.2
LDLRAD3-203ENST00000528989 C15orf56Q8N910 161 aa16.31■□□□□ 0.2
LDLRAD3-203ENST00000528989 IGHV1-58A0A0C4DH39 117 aa16.31■□□□□ 0.2
LDLRAD3-203ENST00000528989 IGLV5-39A0A0G2JS06 123 aa16.31■□□□□ 0.2
LDLRAD3-203ENST00000528989 TOMM7Q9P0U1 55 aa16.31■□□□□ 0.2
LDLRAD3-203ENST00000528989 SMIM6P0DI80 62 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 TSPEAR-AS2P59090 65 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 HIGD2BQ4VC39 106 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 ORAOV1Q8WV07 137 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 HSBP1L1C9JCN9 74 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 USP17L23D6RBM5 183 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 E9PLD3 99 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 HERVK_113P61574 105 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 VAMP8Q9BV40 100 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 TTTY13Q9BZ97 58 aa16.29■□□□□ 0.2
LDLRAD3-203ENST00000528989 LINC01561Q8N1V8 128 aa16.28■□□□□ 0.2
LDLRAD3-203ENST00000528989 RYR2Q92736 4967 aa16.28■□□□□ 0.2
LDLRAD3-203ENST00000528989 LRCOL1A6NCL2 159 aa16.26■□□□□ 0.19
LDLRAD3-203ENST00000528989 APOMO95445 188 aa16.26■□□□□ 0.19
LDLRAD3-203ENST00000528989 NMUP48645 174 aa16.26■□□□□ 0.19
LDLRAD3-203ENST00000528989 KIAA0087Q14695 138 aa16.26■□□□□ 0.19
LDLRAD3-203ENST00000528989 FRAS1Q86XX4 4008 aa16.25■□□□□ 0.19
LDLRAD3-203ENST00000528989 RTL8CO15255 209 aa16.25■□□□□ 0.19
LDLRAD3-203ENST00000528989 SPATA45Q537H7 98 aa16.25■□□□□ 0.19
LDLRAD3-203ENST00000528989 LEPROTO15243 131 aa16.25■□□□□ 0.19
LDLRAD3-203ENST00000528989 COX7B2Q8TF08 81 aa16.25■□□□□ 0.19
LDLRAD3-203ENST00000528989 DNAH17Q9UFH2 4485 aa16.24■□□□□ 0.19
LDLRAD3-203ENST00000528989 C12orf57Q99622 126 aa16.24■□□□□ 0.19
LDLRAD3-203ENST00000528989 J3QQQ9 107 aa16.23■□□□□ 0.19
LDLRAD3-203ENST00000528989 SPAG11BQ08648 103 aa16.23■□□□□ 0.19
LDLRAD3-203ENST00000528989 C2orf82Q6UX34 121 aa16.23■□□□□ 0.19
LDLRAD3-203ENST00000528989 C6orf226Q5I0X4 101 aa16.22■□□□□ 0.19
LDLRAD3-203ENST00000528989 CFAP161Q6P656 301 aa16.22■□□□□ 0.19
LDLRAD3-203ENST00000528989 PCP2Q8IVA1 136 aa16.22■□□□□ 0.19
LDLRAD3-203ENST00000528989 Q8IZM0 81 aa16.21■□□□□ 0.19
LDLRAD3-203ENST00000528989 TP73-AS1Q9UF72 201 aa16.21■□□□□ 0.19
LDLRAD3-203ENST00000528989 GVQW2A0A096LPI5 108 aaPredicted RBP16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 ZNF561-AS1K7EIQ3 104 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 PRSS2P07478 247 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 S100A12P80511 92 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 PLEKHB2Q96CS7 222 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 LINC00518Q8N0U6 118 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 C14orf144Q96I85 54 aa16.2■□□□□ 0.18
LDLRAD3-203ENST00000528989 TNP2Q05952 138 aa16.19■□□□□ 0.18
LDLRAD3-203ENST00000528989 SLPIP03973 132 aa16.18■□□□□ 0.18
LDLRAD3-203ENST00000528989 LGALS3P17931 250 aaKnown RBP16.18■□□□□ 0.18
LDLRAD3-203ENST00000528989 A0A087WTM6 91 aa16.18■□□□□ 0.18
LDLRAD3-203ENST00000528989 NTN5Q8WTR8 489 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms