RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
CMTM1-211ENST00000528484 TMEM250H0YL14 139 aa6.95□□□□□ -1.3
CMTM1-211ENST00000528484 CEBPGP53567 150 aa6.95□□□□□ -1.3
CMTM1-211ENST00000528484 RIGQ13278 110 aa6.95□□□□□ -1.3
CMTM1-211ENST00000528484 TIMM21Q9BVV7 248 aa6.95□□□□□ -1.3
CMTM1-211ENST00000528484 CARHSP1Q9Y2V2 147 aaKnown RBP6.95□□□□□ -1.3
CMTM1-211ENST00000528484 GHRHP01286 108 aa6.94□□□□□ -1.3
CMTM1-211ENST00000528484 SMDT1Q9H4I9 107 aa6.94□□□□□ -1.3
CMTM1-211ENST00000528484 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
CMTM1-211ENST00000528484 SMKR1H3BMG3 65 aa6.93□□□□□ -1.3
CMTM1-211ENST00000528484 KRTAP1-4P0C5Y4 121 aa6.93□□□□□ -1.3
CMTM1-211ENST00000528484 HBBP68871 147 aa6.93□□□□□ -1.3
CMTM1-211ENST00000528484 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
CMTM1-211ENST00000528484 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-211ENST00000528484 IFITM10A6NMD0 228 aa6.92□□□□□ -1.3
CMTM1-211ENST00000528484 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
CMTM1-211ENST00000528484 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
CMTM1-211ENST00000528484 IGHV3OR16-9A0A0B4J2B5 98 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 TSPAN13O95857 204 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 SMIM7Q9BQ49 75 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 C20orf78Q9BR46 151 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
CMTM1-211ENST00000528484 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
CMTM1-211ENST00000528484 NUPR1O60356 82 aa6.9□□□□□ -1.3
CMTM1-211ENST00000528484 ZNF861PO60384 105 aa6.9□□□□□ -1.3
CMTM1-211ENST00000528484 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
CMTM1-211ENST00000528484 NRACQ8N912 160 aa6.9□□□□□ -1.3
CMTM1-211ENST00000528484 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
CMTM1-211ENST00000528484 CKS2P33552 79 aa6.89□□□□□ -1.31
CMTM1-211ENST00000528484 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
CMTM1-211ENST00000528484 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
CMTM1-211ENST00000528484 OSTCQ9NRP0 149 aa6.89□□□□□ -1.31
CMTM1-211ENST00000528484 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
CMTM1-211ENST00000528484 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
CMTM1-211ENST00000528484 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
CMTM1-211ENST00000528484 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
CMTM1-211ENST00000528484 NAT8BQ9UHF3 227 aa6.88□□□□□ -1.31
CMTM1-211ENST00000528484 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
CMTM1-211ENST00000528484 PRSS2P07478 247 aa6.87□□□□□ -1.31
CMTM1-211ENST00000528484 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
CMTM1-211ENST00000528484 RPL32P62910 135 aaKnown RBP6.87□□□□□ -1.31
CMTM1-211ENST00000528484 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
CMTM1-211ENST00000528484 FAM104BQ5XKR9 115 aa6.87□□□□□ -1.31
CMTM1-211ENST00000528484 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
CMTM1-211ENST00000528484 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
CMTM1-211ENST00000528484 A0A1B0GW15 77 aa6.86□□□□□ -1.31
CMTM1-211ENST00000528484 CRYGAP11844 174 aa6.86□□□□□ -1.31
CMTM1-211ENST00000528484 RAB5AP20339 215 aa6.86□□□□□ -1.31
CMTM1-211ENST00000528484 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
CMTM1-211ENST00000528484 SMIM2Q9BVW6 85 aa6.86□□□□□ -1.31
CMTM1-211ENST00000528484 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
CMTM1-211ENST00000528484 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
CMTM1-211ENST00000528484 S100A8P05109 93 aa6.85□□□□□ -1.31
CMTM1-211ENST00000528484 CKS1BP61024 79 aa6.85□□□□□ -1.31
CMTM1-211ENST00000528484 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
CMTM1-211ENST00000528484 F8W036 122 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 KIAA0087Q14695 138 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
CMTM1-211ENST00000528484 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 CTDSP1Q9GZU7 261 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 V9GYV3 84 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
CMTM1-211ENST00000528484 Q6ZN92 141 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 TEX43Q6ZNM6 134 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 TCTE3Q8IZS6 198 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
CMTM1-211ENST00000528484 D6R8Y8 96 aa6.82□□□□□ -1.32
CMTM1-211ENST00000528484 PPBPP02775 128 aa6.82□□□□□ -1.32
CMTM1-211ENST00000528484 FAM74A3Q4VXF1 159 aa6.82□□□□□ -1.32
CMTM1-211ENST00000528484 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
CMTM1-211ENST00000528484 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-211ENST00000528484 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
CMTM1-211ENST00000528484 BCE1O60756 84 aa6.81□□□□□ -1.32
CMTM1-211ENST00000528484 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
CMTM1-211ENST00000528484 ALKAL2Q6UX46 152 aa6.81□□□□□ -1.32
CMTM1-211ENST00000528484 MRPL55Q7Z7F7 128 aaKnown RBP6.81□□□□□ -1.32
CMTM1-211ENST00000528484 PYGO1Q9Y3Y4 419 aa6.81□□□□□ -1.32
CMTM1-211ENST00000528484 A0A087X002 238 aa6.8□□□□□ -1.32
CMTM1-211ENST00000528484 ADIRFQ15847 76 aa6.8□□□□□ -1.32
CMTM1-211ENST00000528484 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
CMTM1-211ENST00000528484 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
CMTM1-211ENST00000528484 IGLV4-3A0A075B6K6 122 aa6.79□□□□□ -1.32
CMTM1-211ENST00000528484 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
CMTM1-211ENST00000528484 ORMDL3Q8N138 153 aa6.79□□□□□ -1.32
CMTM1-211ENST00000528484 ALKBH7Q9BT30 221 aaPredicted RBP6.79□□□□□ -1.32
CMTM1-211ENST00000528484 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
CMTM1-211ENST00000528484 NPYP01303 97 aa6.78□□□□□ -1.32
CMTM1-211ENST00000528484 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
CMTM1-211ENST00000528484 Q8IZM0 81 aa6.78□□□□□ -1.32
CMTM1-211ENST00000528484 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
CMTM1-211ENST00000528484 VCX2Q9H322 139 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms