RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 K7EMI3 77 aa6.98□□□□□ -1.29
NR1H3-230ENST00000527949 NPSP0C0P6 89 aa6.98□□□□□ -1.29
NR1H3-230ENST00000527949 RPL39P62891 51 aaKnown RBP6.98□□□□□ -1.29
NR1H3-230ENST00000527949 IMMP2LQ96T52 175 aa6.98□□□□□ -1.29
NR1H3-230ENST00000527949 IGKV2-24A0A0C4DH68 120 aa6.97□□□□□ -1.29
NR1H3-230ENST00000527949 RAB5AP20339 215 aa6.97□□□□□ -1.29
NR1H3-230ENST00000527949 PTTG1IPP53801 180 aa6.97□□□□□ -1.29
NR1H3-230ENST00000527949 UQCC3Q6UW78 93 aa6.97□□□□□ -1.29
NR1H3-230ENST00000527949 IFI27P40305 119 aaPredicted RBP6.96□□□□□ -1.3
NR1H3-230ENST00000527949 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
NR1H3-230ENST00000527949 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
NR1H3-230ENST00000527949 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
NR1H3-230ENST00000527949 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
NR1H3-230ENST00000527949 PKHD1L1Q86WI1 4243 aa6.96□□□□□ -1.3
NR1H3-230ENST00000527949 TRAV9-1A0A075B6T8 112 aa6.95□□□□□ -1.3
NR1H3-230ENST00000527949 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
NR1H3-230ENST00000527949 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
NR1H3-230ENST00000527949 Q8N8P6 123 aa6.95□□□□□ -1.3
NR1H3-230ENST00000527949 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
NR1H3-230ENST00000527949 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
NR1H3-230ENST00000527949 A0A087WZ39 114 aa6.94□□□□□ -1.3
NR1H3-230ENST00000527949 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
NR1H3-230ENST00000527949 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.94□□□□□ -1.3
NR1H3-230ENST00000527949 SPAG11BQ08648 103 aa6.94□□□□□ -1.3
NR1H3-230ENST00000527949 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
NR1H3-230ENST00000527949 CTDSP1Q9GZU7 261 aa6.94□□□□□ -1.3
NR1H3-230ENST00000527949 NXT2Q9NPJ8 142 aaKnown RBP6.94□□□□□ -1.3
NR1H3-230ENST00000527949 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 IGLV4-3A0A075B6K6 122 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 G0S2P27469 103 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
NR1H3-230ENST00000527949 NDUFA1O15239 70 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 Q6ZRP5 223 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 AMELXQ99217 191 aa6.92□□□□□ -1.3
NR1H3-230ENST00000527949 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
NR1H3-230ENST00000527949 TMEM218A2RU14 115 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 SPINK6Q6UWN8 80 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 TEX43Q6ZNM6 134 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
NR1H3-230ENST00000527949 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 UBE2D1P51668 147 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
NR1H3-230ENST00000527949 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 ODF1Q14990 250 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 Q6ZN92 141 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 C2orf88Q9BSF0 95 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
NR1H3-230ENST00000527949 TRBV30A0A0K0K1B3 111 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 LOC389332A0A1B0GUA5 103 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 SEC11AP67812 179 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 IFITM2Q01629 132 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 COX19Q49B96 90 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
NR1H3-230ENST00000527949 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
NR1H3-230ENST00000527949 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
NR1H3-230ENST00000527949 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
NR1H3-230ENST00000527949 GNB1LQ9BYB4 327 aa6.88□□□□□ -1.31
NR1H3-230ENST00000527949 VCX2Q9H322 139 aa6.88□□□□□ -1.31
NR1H3-230ENST00000527949 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
NR1H3-230ENST00000527949 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
NR1H3-230ENST00000527949 C10orf25Q5T742 122 aa6.87□□□□□ -1.31
NR1H3-230ENST00000527949 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
NR1H3-230ENST00000527949 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
NR1H3-230ENST00000527949 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
NR1H3-230ENST00000527949 S100PP25815 95 aa6.86□□□□□ -1.31
NR1H3-230ENST00000527949 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
NR1H3-230ENST00000527949 MT-ND6P03923 174 aa6.85□□□□□ -1.31
NR1H3-230ENST00000527949 HERVK_113P63121 156 aa6.85□□□□□ -1.31
NR1H3-230ENST00000527949 ERASQ7Z444 233 aa6.85□□□□□ -1.31
NR1H3-230ENST00000527949 Q8IZM0 81 aa6.85□□□□□ -1.31
NR1H3-230ENST00000527949 LRP2P98164 4655 aa6.85□□□□□ -1.31
NR1H3-230ENST00000527949 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
NR1H3-230ENST00000527949 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
NR1H3-230ENST00000527949 RHEBQ15382 184 aa6.84□□□□□ -1.31
NR1H3-230ENST00000527949 PACRGQ96M98 296 aaPredicted RBP6.84□□□□□ -1.31
NR1H3-230ENST00000527949 PSORS1C2Q9UIG4 136 aa6.84□□□□□ -1.31
NR1H3-230ENST00000527949 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
NR1H3-230ENST00000527949 ALKBH7Q9BT30 221 aaPredicted RBP6.83□□□□□ -1.32
NR1H3-230ENST00000527949 RNF213Q63HN8 5207 aa6.83□□□□□ -1.32
NR1H3-230ENST00000527949 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
NR1H3-230ENST00000527949 PRSS2P07478 247 aa6.82□□□□□ -1.32
NR1H3-230ENST00000527949 CXCL5P42830 114 aa6.82□□□□□ -1.32
NR1H3-230ENST00000527949 KIAA1644Q3SXP7 199 aa6.82□□□□□ -1.32
NR1H3-230ENST00000527949 PHF5AQ7RTV0 110 aaKnown RBP6.82□□□□□ -1.32
NR1H3-230ENST00000527949 COMMD7Q86VX2 200 aa6.82□□□□□ -1.32
NR1H3-230ENST00000527949 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
NR1H3-230ENST00000527949 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms