RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CARHSP1Q9Y2V2 147 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-217ENST00000527644 IGLV4-69A0A075B6H9 119 aa16.74■□□□□ 0.27
TSPAN4-217ENST00000527644 RPL37AP61513 92 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-217ENST00000527644 CYSLTR1Q9Y271 337 aa16.74■□□□□ 0.27
TSPAN4-217ENST00000527644 IGLV4-3A0A075B6K6 122 aa16.73■□□□□ 0.27
TSPAN4-217ENST00000527644 RHEBQ15382 184 aa16.73■□□□□ 0.27
TSPAN4-217ENST00000527644 C2orf66Q6UXQ4 117 aa16.73■□□□□ 0.27
TSPAN4-217ENST00000527644 TMEM141Q96I45 108 aa16.73■□□□□ 0.27
TSPAN4-217ENST00000527644 PLAC8Q9NZF1 115 aa16.73■□□□□ 0.27
TSPAN4-217ENST00000527644 IGHV3OR16-9A0A0B4J2B5 98 aa16.72■□□□□ 0.27
TSPAN4-217ENST00000527644 IGKV2-24A0A0C4DH68 120 aa16.72■□□□□ 0.27
TSPAN4-217ENST00000527644 KIAA1644Q3SXP7 199 aa16.72■□□□□ 0.27
TSPAN4-217ENST00000527644 GNB1LQ9BYB4 327 aa16.72■□□□□ 0.27
TSPAN4-217ENST00000527644 MAJINQ3KP22 176 aa16.71■□□□□ 0.27
TSPAN4-217ENST00000527644 LINC00474Q9P2X8 69 aa16.71■□□□□ 0.27
TSPAN4-217ENST00000527644 COX19Q49B96 90 aa16.7■□□□□ 0.26
TSPAN4-217ENST00000527644 C2orf48Q96LS8 159 aa16.7■□□□□ 0.26
TSPAN4-217ENST00000527644 A0A096LNI7 61 aa16.69■□□□□ 0.26
TSPAN4-217ENST00000527644 OR10D4PQ8NGN7 298 aa16.69■□□□□ 0.26
TSPAN4-217ENST00000527644 CAMK2N2Q96S95 79 aa16.69■□□□□ 0.26
TSPAN4-217ENST00000527644 RPS10P5Q9NQ39 176 aa16.69■□□□□ 0.26
TSPAN4-217ENST00000527644 NPSP0C0P6 89 aa16.68■□□□□ 0.26
TSPAN4-217ENST00000527644 G0S2P27469 103 aa16.68■□□□□ 0.26
TSPAN4-217ENST00000527644 TEX43Q6ZNM6 134 aa16.68■□□□□ 0.26
TSPAN4-217ENST00000527644 Q6ZRU5 148 aa16.68■□□□□ 0.26
TSPAN4-217ENST00000527644 TGIF2-C20orf24A0A0A6YYL0 155 aa16.67■□□□□ 0.26
TSPAN4-217ENST00000527644 SPAG11BQ08648 103 aa16.67■□□□□ 0.26
TSPAN4-217ENST00000527644 Q6ZN92 141 aa16.67■□□□□ 0.26
TSPAN4-217ENST00000527644 LINC00242Q5T6M2 205 aa16.66■□□□□ 0.26
TSPAN4-217ENST00000527644 STPG4Q8N801 248 aa16.66■□□□□ 0.26
TSPAN4-217ENST00000527644 C2orf88Q9BSF0 95 aa16.66■□□□□ 0.26
TSPAN4-217ENST00000527644 ORAOV1Q8WV07 137 aa16.65■□□□□ 0.26
TSPAN4-217ENST00000527644 VCX2Q9H322 139 aa16.65■□□□□ 0.26
TSPAN4-217ENST00000527644 IGIPA6NJ69 53 aa16.64■□□□□ 0.25
TSPAN4-217ENST00000527644 MT-ND6P03923 174 aa16.64■□□□□ 0.25
TSPAN4-217ENST00000527644 AMELXQ99217 191 aa16.64■□□□□ 0.25
TSPAN4-217ENST00000527644 HERC1Q15751 4861 aa16.63■□□□□ 0.25
TSPAN4-217ENST00000527644 LOC107984640A0A0U1RRK4 108 aa16.63■□□□□ 0.25
TSPAN4-217ENST00000527644 F8WDY8 70 aa16.63■□□□□ 0.25
TSPAN4-217ENST00000527644 UBE2D1P51668 147 aa16.63■□□□□ 0.25
TSPAN4-217ENST00000527644 ALKBH7Q9BT30 221 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-217ENST00000527644 A0A087WZ39 114 aa16.62■□□□□ 0.25
TSPAN4-217ENST00000527644 C7orf33Q8WU49 177 aa16.62■□□□□ 0.25
TSPAN4-217ENST00000527644 KRTAP29-1A8MX34 341 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-217ENST00000527644 RNF151Q2KHN1 245 aa16.61■□□□□ 0.25
TSPAN4-217ENST00000527644 PAPPA-AS1Q5QFB9 102 aa16.61■□□□□ 0.25
TSPAN4-217ENST00000527644 LINC00173Q6ZV60 143 aa16.61■□□□□ 0.25
TSPAN4-217ENST00000527644 MRPL18Q9H0U6 180 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-217ENST00000527644 J3QL48 77 aa16.6■□□□□ 0.25
TSPAN4-217ENST00000527644 PTTG1IPP53801 180 aa16.6■□□□□ 0.25
TSPAN4-217ENST00000527644 FABP9Q0Z7S8 132 aa16.6■□□□□ 0.25
TSPAN4-217ENST00000527644 TOMM6Q96B49 74 aa16.6■□□□□ 0.25
TSPAN4-217ENST00000527644 APOC3P02656 99 aa16.59■□□□□ 0.25
TSPAN4-217ENST00000527644 GAGE2BQ13066 116 aa16.59■□□□□ 0.25
TSPAN4-217ENST00000527644 ZC2HC1BQ5TFG8 222 aa16.59■□□□□ 0.25
TSPAN4-217ENST00000527644 TIMM17AQ99595 171 aa16.59■□□□□ 0.25
TSPAN4-217ENST00000527644 NDUFA5Q16718 116 aa16.58■□□□□ 0.24
TSPAN4-217ENST00000527644 MRPL35Q9NZE8 188 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-217ENST00000527644 LINC01546A6NGU7 62 aa16.57■□□□□ 0.24
TSPAN4-217ENST00000527644 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-217ENST00000527644 NDUFA1O15239 70 aa16.57■□□□□ 0.24
TSPAN4-217ENST00000527644 LINC01561Q8N1V8 128 aa16.57■□□□□ 0.24
TSPAN4-217ENST00000527644 SNAPINO95295 136 aa16.56■□□□□ 0.24
TSPAN4-217ENST00000527644 HNRNPA3P51991 378 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-217ENST00000527644 FAM19A3Q7Z5A8 133 aa16.56■□□□□ 0.24
TSPAN4-217ENST00000527644 SVBPQ8N300 66 aa16.56■□□□□ 0.24
TSPAN4-217ENST00000527644 PKHD1L1Q86WI1 4243 aa16.56■□□□□ 0.24
TSPAN4-217ENST00000527644 LINC01549A6NIU2 74 aa16.55■□□□□ 0.24
TSPAN4-217ENST00000527644 ERASQ7Z444 233 aa16.55■□□□□ 0.24
TSPAN4-217ENST00000527644 A0A0J9YXV3 536 aa16.54■□□□□ 0.24
TSPAN4-217ENST00000527644 SCGB3A1Q96QR1 104 aa16.54■□□□□ 0.24
TSPAN4-217ENST00000527644 OXTP01178 125 aa16.53■□□□□ 0.24
TSPAN4-217ENST00000527644 SEC11AP67812 179 aa16.53■□□□□ 0.24
TSPAN4-217ENST00000527644 KIAA0087Q14695 138 aa16.53■□□□□ 0.24
TSPAN4-217ENST00000527644 LRP1Q07954 4544 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-217ENST00000527644 RPL18AQ02543 176 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-217ENST00000527644 UNQ6190/PRO20217Q6UXQ8 127 aa16.52■□□□□ 0.24
TSPAN4-217ENST00000527644 FA2HQ7L5A8 372 aa16.52■□□□□ 0.24
TSPAN4-217ENST00000527644 C10orf25Q5T742 122 aa16.51■□□□□ 0.23
TSPAN4-217ENST00000527644 TRAPPC1Q9Y5R8 145 aa16.51■□□□□ 0.23
TSPAN4-217ENST00000527644 HERVK_113P63121 156 aa16.5■□□□□ 0.23
TSPAN4-217ENST00000527644 SMCO4Q9NRQ5 59 aa16.5■□□□□ 0.23
TSPAN4-217ENST00000527644 FAT3Q8TDW7 4589 aa16.49■□□□□ 0.23
TSPAN4-217ENST00000527644 TLX1NBP0CAT3 122 aa16.48■□□□□ 0.23
TSPAN4-217ENST00000527644 C6orf48Q9UBA6 75 aa16.48■□□□□ 0.23
TSPAN4-217ENST00000527644 A0A1W2PNN7 141 aa16.47■□□□□ 0.23
TSPAN4-217ENST00000527644 GEMIN7Q9H840 131 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-217ENST00000527644 PRR3P79522 188 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-217ENST00000527644 TRBV30A0A0K0K1B3 111 aa16.45■□□□□ 0.22
TSPAN4-217ENST00000527644 PRSS2P07478 247 aa16.45■□□□□ 0.22
TSPAN4-217ENST00000527644 C9orf116Q5BN46 136 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-217ENST00000527644 CDKN2A-AS1Q9UH64 79 aa16.45■□□□□ 0.22
TSPAN4-217ENST00000527644 C2orf82Q6UX34 121 aa16.44■□□□□ 0.22
TSPAN4-217ENST00000527644 Q6ZRP5 223 aa16.43■□□□□ 0.22
TSPAN4-217ENST00000527644 C18orf32Q8TCD1 76 aa16.43■□□□□ 0.22
TSPAN4-217ENST00000527644 PACRGQ96M98 296 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-217ENST00000527644 Q8IZM0 81 aa16.42■□□□□ 0.22
TSPAN4-217ENST00000527644 TOMM7Q9P0U1 55 aa16.42■□□□□ 0.22
TSPAN4-217ENST00000527644 TINCRA0A1B0GVN0 87 aa16.41■□□□□ 0.22
TSPAN4-217ENST00000527644 LINC00614P0C842 121 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms