RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 C2orf66Q6UXQ4 117 aa12.24□□□□□ -0.45
PKP3-204ENST00000526971 ALKBH7Q9BT30 221 aaPredicted RBP12.24□□□□□ -0.45
PKP3-204ENST00000526971 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
PKP3-204ENST00000526971 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
PKP3-204ENST00000526971 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
PKP3-204ENST00000526971 MALP21145 153 aa12.23□□□□□ -0.45
PKP3-204ENST00000526971 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
PKP3-204ENST00000526971 IGLV4-3A0A075B6K6 122 aa12.22□□□□□ -0.45
PKP3-204ENST00000526971 IFITM10A6NMD0 228 aa12.22□□□□□ -0.45
PKP3-204ENST00000526971 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
PKP3-204ENST00000526971 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.45
PKP3-204ENST00000526971 C5orf38Q86SI9 138 aa12.21□□□□□ -0.45
PKP3-204ENST00000526971 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
PKP3-204ENST00000526971 TMEM141Q96I45 108 aa12.21□□□□□ -0.45
PKP3-204ENST00000526971 G0S2P27469 103 aa12.2□□□□□ -0.46
PKP3-204ENST00000526971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
PKP3-204ENST00000526971 IGIPA6NJ69 53 aa12.19□□□□□ -0.46
PKP3-204ENST00000526971 ZNF561-AS1K7EIQ3 104 aa12.19□□□□□ -0.46
PKP3-204ENST00000526971 NPSP0C0P6 89 aa12.19□□□□□ -0.46
PKP3-204ENST00000526971 LINC00526Q96FQ7 95 aa12.19□□□□□ -0.46
PKP3-204ENST00000526971 IGHV3OR16-9A0A0B4J2B5 98 aa12.18□□□□□ -0.46
PKP3-204ENST00000526971 PANO1I0J062 215 aa12.18□□□□□ -0.46
PKP3-204ENST00000526971 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
PKP3-204ENST00000526971 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
PKP3-204ENST00000526971 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
PKP3-204ENST00000526971 APOMO95445 188 aa12.17□□□□□ -0.46
PKP3-204ENST00000526971 OXTP01178 125 aa12.17□□□□□ -0.46
PKP3-204ENST00000526971 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
PKP3-204ENST00000526971 Q6ZN92 141 aa12.17□□□□□ -0.46
PKP3-204ENST00000526971 TOMM6Q96B49 74 aa12.17□□□□□ -0.46
PKP3-204ENST00000526971 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 SLC7A5P1Q8MH63 180 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 AMELXQ99217 191 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 C2orf88Q9BSF0 95 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 VCX2Q9H322 139 aa12.16□□□□□ -0.46
PKP3-204ENST00000526971 UBE2D1P51668 147 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.46
PKP3-204ENST00000526971 COX6A2Q02221 97 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 ZC2HC1BQ5TFG8 222 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 LINC00173Q6ZV60 143 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 CARD19Q96LW7 228 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
PKP3-204ENST00000526971 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
PKP3-204ENST00000526971 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
PKP3-204ENST00000526971 PLA2G2DQ9UNK4 145 aa12.14□□□□□ -0.47
PKP3-204ENST00000526971 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
PKP3-204ENST00000526971 PAPPA-AS1Q5QFB9 102 aa12.13□□□□□ -0.47
PKP3-204ENST00000526971 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
PKP3-204ENST00000526971 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
PKP3-204ENST00000526971 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
PKP3-204ENST00000526971 A0A087WZ39 114 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 ERASQ7Z444 233 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 SCGB3A1Q96QR1 104 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 SMCO4Q9NRQ5 59 aa12.12□□□□□ -0.47
PKP3-204ENST00000526971 Q6ZRU5 148 aa12.11□□□□□ -0.47
PKP3-204ENST00000526971 ORAOV1Q8WV07 137 aa12.11□□□□□ -0.47
PKP3-204ENST00000526971 CAMK2N2Q96S95 79 aa12.11□□□□□ -0.47
PKP3-204ENST00000526971 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
PKP3-204ENST00000526971 C18orf32Q8TCD1 76 aa12.1□□□□□ -0.47
PKP3-204ENST00000526971 A0A087WYN8 130 aa12.09□□□□□ -0.47
PKP3-204ENST00000526971 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
PKP3-204ENST00000526971 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
PKP3-204ENST00000526971 CBLN2Q8IUK8 224 aa12.09□□□□□ -0.47
PKP3-204ENST00000526971 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
PKP3-204ENST00000526971 F8WDY8 70 aa12.08□□□□□ -0.48
PKP3-204ENST00000526971 LINC01561Q8N1V8 128 aa12.08□□□□□ -0.48
PKP3-204ENST00000526971 A0A096LNI7 61 aa12.07□□□□□ -0.48
PKP3-204ENST00000526971 LINC00614P0C842 121 aa12.07□□□□□ -0.48
PKP3-204ENST00000526971 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
PKP3-204ENST00000526971 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
PKP3-204ENST00000526971 PLAC8Q9NZF1 115 aa12.07□□□□□ -0.48
PKP3-204ENST00000526971 SEC11AP67812 179 aa12.06□□□□□ -0.48
PKP3-204ENST00000526971 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
PKP3-204ENST00000526971 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
PKP3-204ENST00000526971 RNF151Q2KHN1 245 aa12.05□□□□□ -0.48
PKP3-204ENST00000526971 MT1HL1P0DM35 61 aa12.04□□□□□ -0.48
PKP3-204ENST00000526971 RAB5BP61020 215 aa12.04□□□□□ -0.48
PKP3-204ENST00000526971 HERVK_113P63121 156 aa12.04□□□□□ -0.48
PKP3-204ENST00000526971 KIAA0087Q14695 138 aa12.04□□□□□ -0.48
PKP3-204ENST00000526971 MRPL35Q9NZE8 188 aaKnown RBP12.04□□□□□ -0.48
PKP3-204ENST00000526971 A0A096LNJ9 63 aa12.03□□□□□ -0.48
PKP3-204ENST00000526971 A0A0J9YXV3 536 aa12.03□□□□□ -0.48
PKP3-204ENST00000526971 NDUFA1O15239 70 aa12.03□□□□□ -0.48
PKP3-204ENST00000526971 STPG4Q8N801 248 aa12.03□□□□□ -0.48
PKP3-204ENST00000526971 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
PKP3-204ENST00000526971 GEMIN7Q9H840 131 aaKnown RBP12.03□□□□□ -0.48
PKP3-204ENST00000526971 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.49
PKP3-204ENST00000526971 PTTG1IPP53801 180 aa12.02□□□□□ -0.49
PKP3-204ENST00000526971 C10orf25Q5T742 122 aa12.02□□□□□ -0.49
PKP3-204ENST00000526971 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
PKP3-204ENST00000526971 HBDP02042 147 aa12.01□□□□□ -0.49
PKP3-204ENST00000526971 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
PKP3-204ENST00000526971 PMVKQ15126 192 aa12.01□□□□□ -0.49
PKP3-204ENST00000526971 UNQ6190/PRO20217Q6UXQ8 127 aa12.01□□□□□ -0.49
PKP3-204ENST00000526971 TNXBP22105 4242 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms