RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 YPEL4Q96NS1 127 aa10.42□□□□□ -0.74
SSSCA1-202ENST00000526433 VCX2Q9H322 139 aa10.42□□□□□ -0.74
SSSCA1-202ENST00000526433 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 IGHV3OR16-9A0A0B4J2B5 98 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 NPSP0C0P6 89 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 Q6ZN92 141 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 CIRBP-AS1Q8TBR5 109 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
SSSCA1-202ENST00000526433 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 APOMO95445 188 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 Q5VSD8 79 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 FA2HQ7L5A8 372 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 AMELXQ99217 191 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
SSSCA1-202ENST00000526433 PANO1I0J062 215 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 COX6A2Q02221 97 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 LINC00173Q6ZV60 143 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 SMCO4Q9NRQ5 59 aa10.39□□□□□ -0.75
SSSCA1-202ENST00000526433 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 UBE2D1P51668 147 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 SYCNQ0VAF6 134 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 ERASQ7Z444 233 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 CBLN2Q8IUK8 224 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 TIMM17AQ99595 171 aa10.38□□□□□ -0.75
SSSCA1-202ENST00000526433 PAPPA-AS1Q5QFB9 102 aa10.37□□□□□ -0.75
SSSCA1-202ENST00000526433 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
SSSCA1-202ENST00000526433 CARD19Q96LW7 228 aa10.37□□□□□ -0.75
SSSCA1-202ENST00000526433 LINC01549A6NIU2 74 aa10.36□□□□□ -0.75
SSSCA1-202ENST00000526433 CHTF8P0CG12 524 aa10.36□□□□□ -0.75
SSSCA1-202ENST00000526433 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
SSSCA1-202ENST00000526433 SRRM2Q9UQ35 2752 aaKnown RBP10.36□□□□□ -0.75
SSSCA1-202ENST00000526433 A0A087WZ39 114 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 ATP6V1G1O75348 118 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 LINC00614P0C842 121 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 ORAOV1Q8WV07 137 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 C2orf48Q96LS8 159 aa10.35□□□□□ -0.75
SSSCA1-202ENST00000526433 SPAG11BQ08648 103 aa10.34□□□□□ -0.75
SSSCA1-202ENST00000526433 Q6ZRU5 148 aa10.34□□□□□ -0.75
SSSCA1-202ENST00000526433 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
SSSCA1-202ENST00000526433 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
SSSCA1-202ENST00000526433 RAB5BP61020 215 aa10.32□□□□□ -0.76
SSSCA1-202ENST00000526433 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
SSSCA1-202ENST00000526433 SPACA4Q8TDM5 124 aa10.32□□□□□ -0.76
SSSCA1-202ENST00000526433 A0A087WYN8 130 aa10.31□□□□□ -0.76
SSSCA1-202ENST00000526433 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
SSSCA1-202ENST00000526433 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
SSSCA1-202ENST00000526433 INAFM2P0DMQ5 153 aa10.31□□□□□ -0.76
SSSCA1-202ENST00000526433 SEC11AP67812 179 aa10.31□□□□□ -0.76
SSSCA1-202ENST00000526433 A0A096LNI7 61 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 A0A096LNJ9 63 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 A0A0J9YXV3 536 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 F8WDY8 70 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 HERVK_113P63121 156 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 CST9LQ9H4G1 147 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 PKIGQ9Y2B9 76 aa10.3□□□□□ -0.76
SSSCA1-202ENST00000526433 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 KIAA0087Q14695 138 aa10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 PMVKQ15126 192 aa10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
SSSCA1-202ENST00000526433 NDUFA1O15239 70 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 HBDP02042 147 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 S100A1P23297 94 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
SSSCA1-202ENST00000526433 TRGC2P03986 189 aa10.27□□□□□ -0.77
SSSCA1-202ENST00000526433 GAGE2BQ13066 116 aa10.27□□□□□ -0.77
SSSCA1-202ENST00000526433 C10orf25Q5T742 122 aa10.27□□□□□ -0.77
SSSCA1-202ENST00000526433 MRPL35Q9NZE8 188 aaKnown RBP10.27□□□□□ -0.77
SSSCA1-202ENST00000526433 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
SSSCA1-202ENST00000526433 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
SSSCA1-202ENST00000526433 COLCA2A8K830 154 aa10.26□□□□□ -0.77
SSSCA1-202ENST00000526433 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
SSSCA1-202ENST00000526433 STPG4Q8N801 248 aa10.26□□□□□ -0.77
SSSCA1-202ENST00000526433 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
SSSCA1-202ENST00000526433 NDUFA6P56556 154 aa10.25□□□□□ -0.77
SSSCA1-202ENST00000526433 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
SSSCA1-202ENST00000526433 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
SSSCA1-202ENST00000526433 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 LINC00469Q8N7U9 141 aa10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
SSSCA1-202ENST00000526433 ATP5LO75964 103 aa10.23□□□□□ -0.77
SSSCA1-202ENST00000526433 PRSS2P07478 247 aa10.23□□□□□ -0.77
SSSCA1-202ENST00000526433 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms