RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 H3BPC8 53 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 NDUFB6O95139 128 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 IGHV3-53P01767 116 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
CD44-220ENST00000525688 IQCJQ1A5X6 159 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 Q8IYB0 196 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 OR2T35Q8NGX2 323 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 LINC00052Q96N35 136 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 R4GMQ9 66 aa2.88□□□□□ -1.95
CD44-220ENST00000525688 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 H3BQ15 152 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 SSSCA1O60232 199 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 MRPS14O60783 128 aaKnown RBP2.87□□□□□ -1.95
CD44-220ENST00000525688 COX7CP15954 63 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 ESRGQ1W209 222 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 LYZL1Q6UWQ5 148 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 Q8N814 137 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 CYB561D1Q8N8Q1 229 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 TTTY10Q9BZA0 68 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 TMEM242Q9NWH2 141 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 TIMM9Q9Y5J7 89 aa2.87□□□□□ -1.95
CD44-220ENST00000525688 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 C17orf112F2Z3M2 114 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 H7C2G1 150 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 J3QLW9 94 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 SNCGO76070 127 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 DEFA4P12838 97 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 ROMO1P60602 79 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 PEA15Q15121 130 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 UNQ5815/PRO19632Q6UWF5 114 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 Q6ZQT0 140 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 ZNF826PQ6ZT77 177 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 SBSPONQ8IVN8 264 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 SLC50A1Q9BRV3 221 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 KAAG1Q9UBP8 84 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
CD44-220ENST00000525688 ANK2Q01484 3957 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 ARHGAP32A7KAX9 2087 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 A6NIN4 97 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 K7EP34 96 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 IL5P05113 134 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 PIPP12273 146 aaPredicted RBP2.85□□□□□ -1.95
CD44-220ENST00000525688 XAF1Q6GPH4 301 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 Q8N8P6 123 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 DEFB108BQ8NET1 73 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 UBALD1Q8TB05 177 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 CST11Q9H112 138 aa2.85□□□□□ -1.95
CD44-220ENST00000525688 IGKV1D-17A0A075B6S4 117 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 H3BSH0 61 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 GYPAP02724 150 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 ASIPP42127 132 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
CD44-220ENST00000525688 ZNF816Q0VGE8 651 aaPredicted RBP2.84□□□□□ -1.95
CD44-220ENST00000525688 Q8NAQ8 132 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 OR8B3Q8NGG8 313 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 GAFA1Q96PS6 74 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 OR8B2Q96RD0 313 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 KLK12Q9UKR0 248 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
CD44-220ENST00000525688 PKD1L1Q8TDX9 2849 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 NACAE9PAV3 2078 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 TRAV3A0A0B4J244 114 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 UBE2L5PA0A1B0GUS4 154 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 C11orf86A6NJI1 115 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
CD44-220ENST00000525688 TFF1P04155 84 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 NMBP08949 121 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 SNCAP37840 140 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 CAV3P56539 151 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 UBE2L3P68036 154 aaKnown RBP2.83□□□□□ -1.96
CD44-220ENST00000525688 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 LGALSLQ3ZCW2 172 aaPredicted RBP2.83□□□□□ -1.96
CD44-220ENST00000525688 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 S100A13Q99584 98 aa2.83□□□□□ -1.96
CD44-220ENST00000525688 VWFP04275 2813 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 F8W1H4 67 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 CRPP02741 224 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 INSL4Q14641 139 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 SLC25A26Q70HW3 274 aa2.82□□□□□ -1.96
CD44-220ENST00000525688 LYPD6Q86Y78 171 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms