RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC00242Q5T6M2 205 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 CD164L2Q6UWJ8 174 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BHQ93079 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 AMELXQ99217 191 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BNQ99877 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BMQ99879 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 CST9LQ9H4G1 147 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 PGPEP1Q9NXJ5 209 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 DNAH10Q8IVF4 4471 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 FAT2Q9NYQ8 4349 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 DNAH17Q9UFH2 4485 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 IGHV3OR16-9A0A0B4J2B5 98 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 PANO1I0J062 215 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 RAB5BP61020 215 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 ORAOV1Q8WV07 137 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 TIMM17AQ99595 171 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 C2orf88Q9BSF0 95 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 CDKN2A-AS1Q9UH64 79 aa2.98□□□□□ -1.93
CHMP4A-202ENST00000524955 FRAS1Q86XX4 4008 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 IGHV1-58A0A0C4DH39 117 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 ZNF561-AS1K7EIQ3 104 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 SMR3BP02814 79 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 SPINK8P0C7L1 97 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 G0S2P27469 103 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 SPAG11BQ08648 103 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 PMVKQ15126 192 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 C14orf177Q52M58 125 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 C10orf25Q5T742 122 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 CFAP161Q6P656 301 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 C2orf82Q6UX34 121 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 UNQ6190/PRO20217Q6UXQ8 127 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 Q6ZRU5 148 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC00469Q8N7U9 141 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 IFI27L1Q96BM0 104 aa2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 GEMIN7Q9H840 131 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-202ENST00000524955 A0A087WZ39 114 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 C11orf86A6NJI1 115 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 ATP5LO75964 103 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 LEPROTL1O95214 131 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 XGP55808 180 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 SYCNQ0VAF6 134 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 C9orf116Q5BN46 136 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 PAPPA-AS1Q5QFB9 102 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 CDPF1Q6NVV7 123 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 DPH3Q96FX2 82 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 CAMK2N2Q96S95 79 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 CHAC1Q9BUX1 264 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 MRPL35Q9NZE8 188 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 CHTOPQ9Y3Y2 248 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 PKD1P98161 4303 aa2.96□□□□□ -1.94
CHMP4A-202ENST00000524955 A0A096LNI7 61 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 TINCRA0A1B0GVN0 87 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 SMIM1B2RUZ4 78 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 APOMO95445 188 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 NPSP0C0P6 89 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 ZNF22P17026 224 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 CNBPP62633 177 aaKnown RBP2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 HERVK_113P63121 156 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 GAGE2BQ13066 116 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 KIAA0087Q14695 138 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 SCXQ7RTU7 201 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 CARD19Q96LW7 228 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 PACRGQ96M98 296 aaPredicted RBP2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 KRTAP4-5Q9BYR2 181 aa2.95□□□□□ -1.94
CHMP4A-202ENST00000524955 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 PRSS2P07478 247 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 IGLC3P0DOY3 106 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 RPL18AQ02543 176 aaKnown RBP2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 ODF1Q14990 250 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 MAJINQ3KP22 176 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 C6orf226Q5I0X4 101 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 FAM19A3Q7Z5A8 133 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 OR10D4PQ8NGN7 298 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 C6orf48Q9UBA6 75 aa2.94□□□□□ -1.94
CHMP4A-202ENST00000524955 HECTD4Q9Y4D8 3996 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 IGLV5-45A0A087WSX0 123 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 TRAV12-1A0A0B4J245 112 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 A0A0U1RRA0 63 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 LINC01549A6NIU2 74 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 NDUFA1O15239 70 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 KRTDAPP60985 99 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 CKS1BP61024 79 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms