RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
PVT1-220ENST00000524165 BIN3Q9NQY0 253 aa9.84□□□□□ -0.83
PVT1-220ENST00000524165 TP73-AS1Q9UF72 201 aa9.84□□□□□ -0.83
PVT1-220ENST00000524165 A0A1B0GV50 99 aa9.83□□□□□ -0.84
PVT1-220ENST00000524165 UPK1BO75841 260 aa9.83□□□□□ -0.84
PVT1-220ENST00000524165 GNG4P50150 75 aa9.83□□□□□ -0.84
PVT1-220ENST00000524165 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
PVT1-220ENST00000524165 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
PVT1-220ENST00000524165 RAB19A4D1S5 217 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 FCER1GP30273 86 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 CCL20P78556 96 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 Q5BKY6 102 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
PVT1-220ENST00000524165 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 NUDT10Q8NFP7 164 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 NUDT11Q96G61 164 aa9.82□□□□□ -0.84
PVT1-220ENST00000524165 LINC00299Q6ZSB3 139 aa9.8□□□□□ -0.84
PVT1-220ENST00000524165 A0A1B0GVG6 124 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 VCYO14598 125 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 IFITM3Q01628 133 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 FAM213BQ8TBF2 198 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 S100ZQ8WXG8 99 aa9.79□□□□□ -0.84
PVT1-220ENST00000524165 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
PVT1-220ENST00000524165 TRBV20OR9-2A0A075B6H5 130 aa9.77□□□□□ -0.85
PVT1-220ENST00000524165 UBE2AP49459 152 aa9.77□□□□□ -0.85
PVT1-220ENST00000524165 FXYD6-FXYD2A0A087WZ82 144 aa9.76□□□□□ -0.85
PVT1-220ENST00000524165 LINC00469Q8N7U9 141 aa9.76□□□□□ -0.85
PVT1-220ENST00000524165 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
PVT1-220ENST00000524165 MANBALQ9NQG1 85 aa9.76□□□□□ -0.85
PVT1-220ENST00000524165 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
PVT1-220ENST00000524165 UMAD1C9J7I0 102 aa9.75□□□□□ -0.85
PVT1-220ENST00000524165 XP32Q5T750 250 aa9.75□□□□□ -0.85
PVT1-220ENST00000524165 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
PVT1-220ENST00000524165 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
PVT1-220ENST00000524165 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
PVT1-220ENST00000524165 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
PVT1-220ENST00000524165 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
PVT1-220ENST00000524165 H2AFB1P0C5Y9 115 aa9.73□□□□□ -0.85
PVT1-220ENST00000524165 GIPP09681 153 aaPredicted RBP9.72□□□□□ -0.85
PVT1-220ENST00000524165 DAND5Q8N907 189 aa9.72□□□□□ -0.85
PVT1-220ENST00000524165 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
PVT1-220ENST00000524165 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 RAB4AP20338 218 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 HBBP68871 147 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 MRPS36P82909 103 aaKnown RBP9.71□□□□□ -0.86
PVT1-220ENST00000524165 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 TMEM191AQ9H0A3 160 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 SSPOA2VEC9 5147 aa9.71□□□□□ -0.86
PVT1-220ENST00000524165 M0R2T5 61 aa9.7□□□□□ -0.86
PVT1-220ENST00000524165 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
PVT1-220ENST00000524165 PDE6DO43924 150 aa9.69□□□□□ -0.86
PVT1-220ENST00000524165 PPP1R17O96001 155 aa9.69□□□□□ -0.86
PVT1-220ENST00000524165 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
PVT1-220ENST00000524165 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
PVT1-220ENST00000524165 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
PVT1-220ENST00000524165 PNRC1Q12796 327 aaPredicted RBP9.67□□□□□ -0.86
PVT1-220ENST00000524165 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
PVT1-220ENST00000524165 NRACQ8N912 160 aa9.67□□□□□ -0.86
PVT1-220ENST00000524165 K7EN84 100 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 PPP1R2P9O14990 202 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 CKS1BP61024 79 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
PVT1-220ENST00000524165 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
PVT1-220ENST00000524165 GAGE10A6NGK3 116 aa9.65□□□□□ -0.86
PVT1-220ENST00000524165 A8MWL6 223 aa9.65□□□□□ -0.86
PVT1-220ENST00000524165 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
PVT1-220ENST00000524165 PRSS2P07478 247 aa9.65□□□□□ -0.86
PVT1-220ENST00000524165 TCAPO15273 167 aa9.64□□□□□ -0.87
PVT1-220ENST00000524165 ARPC5O15511 151 aa9.64□□□□□ -0.87
PVT1-220ENST00000524165 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
PVT1-220ENST00000524165 NDUFA13Q9P0J0 144 aa9.64□□□□□ -0.87
PVT1-220ENST00000524165 USH2AO75445 5202 aa9.64□□□□□ -0.87
PVT1-220ENST00000524165 SPINK1P00995 79 aa9.63□□□□□ -0.87
PVT1-220ENST00000524165 PRLHP81277 87 aa9.63□□□□□ -0.87
PVT1-220ENST00000524165 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
PVT1-220ENST00000524165 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
PVT1-220ENST00000524165 A0A1B0GUT8 65 aa9.62□□□□□ -0.87
PVT1-220ENST00000524165 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
PVT1-220ENST00000524165 FCGBPQ9Y6R7 5405 aaPredicted RBP9.62□□□□□ -0.87
PVT1-220ENST00000524165 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
PVT1-220ENST00000524165 Q8IZM0 81 aa9.61□□□□□ -0.87
PVT1-220ENST00000524165 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PVT1-220ENST00000524165 IGLV8-61A0A075B6I0 122 aa9.6□□□□□ -0.87
PVT1-220ENST00000524165 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
PVT1-220ENST00000524165 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
PVT1-220ENST00000524165 CT83Q5H943 113 aa9.59□□□□□ -0.87
PVT1-220ENST00000524165 Q6ZN92 141 aa9.59□□□□□ -0.87
PVT1-220ENST00000524165 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
PVT1-220ENST00000524165 Q8NBF4 154 aa9.59□□□□□ -0.87
PVT1-220ENST00000524165 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
PVT1-220ENST00000524165 F8VRH5 84 aa9.58□□□□□ -0.88
PVT1-220ENST00000524165 FAM19A1Q7Z5A9 133 aa9.58□□□□□ -0.88
PVT1-220ENST00000524165 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
PVT1-220ENST00000524165 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
PVT1-220ENST00000524165 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms