RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 FXYD2P54710 66 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 LELP1Q5T871 98 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 HIST1H4GQ99525 98 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 SMIM1B2RUZ4 78 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 CEND1Q8N111 149 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 C10orf126Q8N4M7 172 aa14.29□□□□□ -0.12
SQLE-206ENST00000523430 DEFB131BA0A096LNP1 70 aa14.28□□□□□ -0.12
SQLE-206ENST00000523430 LYPD5Q6UWN5 251 aa14.27□□□□□ -0.12
SQLE-206ENST00000523430 IGLV5-39A0A0G2JS06 123 aa14.27□□□□□ -0.13
SQLE-206ENST00000523430 LINC00959A0A1B0GUT2 108 aa14.27□□□□□ -0.13
SQLE-206ENST00000523430 TAL2Q16559 108 aa14.27□□□□□ -0.13
SQLE-206ENST00000523430 LURAP1LQ8IV03 231 aa14.27□□□□□ -0.13
SQLE-206ENST00000523430 TM2D2Q9BX73 214 aa14.26□□□□□ -0.13
SQLE-206ENST00000523430 NDUFA12Q9UI09 145 aa14.25□□□□□ -0.13
SQLE-206ENST00000523430 TAX1BP3O14907 124 aa14.25□□□□□ -0.13
SQLE-206ENST00000523430 ZFAND6Q6FIF0 208 aa14.25□□□□□ -0.13
SQLE-206ENST00000523430 LINC00269Q8N2A0 174 aa14.24□□□□□ -0.13
SQLE-206ENST00000523430 A0A0J9YXY3 114 aa14.23□□□□□ -0.13
SQLE-206ENST00000523430 ANGP03950 147 aaKnown RBP14.23□□□□□ -0.13
SQLE-206ENST00000523430 DNAH9Q9NYC9 4486 aa14.23□□□□□ -0.13
SQLE-206ENST00000523430 IGHV3OR16-9A0A0B4J2B5 98 aa14.23□□□□□ -0.13
SQLE-206ENST00000523430 A6NDN8 102 aa14.23□□□□□ -0.13
SQLE-206ENST00000523430 PTTG1IPP53801 180 aa14.23□□□□□ -0.13
SQLE-206ENST00000523430 SPANXB1Q9NS25 103 aaPredicted RBP14.22□□□□□ -0.13
SQLE-206ENST00000523430 DNHD1Q96M86 4753 aa14.22□□□□□ -0.13
SQLE-206ENST00000523430 XCL1P47992 114 aa14.21□□□□□ -0.13
SQLE-206ENST00000523430 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
SQLE-206ENST00000523430 K7ERJ3 54 aa14.21□□□□□ -0.14
SQLE-206ENST00000523430 CCL25O15444 150 aa14.21□□□□□ -0.14
SQLE-206ENST00000523430 COX11Q9Y6N1 276 aa14.21□□□□□ -0.14
SQLE-206ENST00000523430 NDUFA1O15239 70 aa14.19□□□□□ -0.14
SQLE-206ENST00000523430 REG3AQ06141 175 aa14.19□□□□□ -0.14
SQLE-206ENST00000523430 SS18Q15532 418 aa14.19□□□□□ -0.14
SQLE-206ENST00000523430 NHP2Q9NX24 153 aaKnown RBP14.19□□□□□ -0.14
SQLE-206ENST00000523430 TRAV10A0A0B4J240 114 aa14.18□□□□□ -0.14
SQLE-206ENST00000523430 C5orf38Q86SI9 138 aa14.18□□□□□ -0.14
SQLE-206ENST00000523430 WFDC10BQ8IUB3 73 aa14.18□□□□□ -0.14
SQLE-206ENST00000523430 LITAFQ99732 161 aa14.18□□□□□ -0.14
SQLE-206ENST00000523430 A0A087WZ39 114 aa14.17□□□□□ -0.14
SQLE-206ENST00000523430 IGHV3-30P01768 117 aa14.17□□□□□ -0.14
SQLE-206ENST00000523430 IGHV3-30-5P0DP03 117 aa14.17□□□□□ -0.14
SQLE-206ENST00000523430 ESRGQ1W209 222 aa14.17□□□□□ -0.14
SQLE-206ENST00000523430 Q9H8V8 135 aa14.17□□□□□ -0.14
SQLE-206ENST00000523430 IGLV10-54A0A075B6I4 117 aa14.16□□□□□ -0.14
SQLE-206ENST00000523430 RAB37Q96AX2 223 aa14.16□□□□□ -0.14
SQLE-206ENST00000523430 TMEM238C9JI98 176 aa14.16□□□□□ -0.14
SQLE-206ENST00000523430 IGHV3-33P01772 117 aa14.16□□□□□ -0.14
SQLE-206ENST00000523430 B9D2Q9BPU9 175 aa14.15□□□□□ -0.14
SQLE-206ENST00000523430 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
SQLE-206ENST00000523430 ZNF625Q96I27 306 aaPredicted RBP14.14□□□□□ -0.15
SQLE-206ENST00000523430 KLK12Q9UKR0 248 aa14.14□□□□□ -0.15
SQLE-206ENST00000523430 SMIM13P0DJ93 91 aa14.14□□□□□ -0.15
SQLE-206ENST00000523430 ADAMTSL4-AS1Q5T5F5 129 aa14.14□□□□□ -0.15
SQLE-206ENST00000523430 COX7B2Q8TF08 81 aa14.14□□□□□ -0.15
SQLE-206ENST00000523430 TOMM7Q9P0U1 55 aa14.13□□□□□ -0.15
SQLE-206ENST00000523430 NAA38Q9BRA0 125 aaKnown RBP14.12□□□□□ -0.15
SQLE-206ENST00000523430 PRR34Q9NV39 138 aa14.12□□□□□ -0.15
SQLE-206ENST00000523430 CD164L2Q6UWJ8 174 aa14.11□□□□□ -0.15
SQLE-206ENST00000523430 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
SQLE-206ENST00000523430 ENHOQ6UWT2 76 aa14.1□□□□□ -0.15
SQLE-206ENST00000523430 COL7A1Q02388 2944 aa14.1□□□□□ -0.15
SQLE-206ENST00000523430 TMEM238LA0A1B0GVL6 79 aa14.1□□□□□ -0.15
SQLE-206ENST00000523430 A6NJY4 79 aa14.1□□□□□ -0.15
SQLE-206ENST00000523430 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 MUSTN1Q8IVN3 82 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 DAND5Q8N907 189 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 C15orf53Q8NAA6 179 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 SPANXDQ9BXN6 97 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 SPANXCQ9NY87 97 aa14.09□□□□□ -0.15
SQLE-206ENST00000523430 TIMM17BO60830 172 aa14.08□□□□□ -0.16
SQLE-206ENST00000523430 MIAQ16674 131 aa14.08□□□□□ -0.16
SQLE-206ENST00000523430 H3BUT2 72 aa14.08□□□□□ -0.16
SQLE-206ENST00000523430 COX7A2LO14548 114 aa14.08□□□□□ -0.16
SQLE-206ENST00000523430 FOXI1Q12951 378 aa14.08□□□□□ -0.16
SQLE-206ENST00000523430 NPC2P61916 151 aa14.07□□□□□ -0.16
SQLE-206ENST00000523430 UBE2WQ96B02 151 aa14.07□□□□□ -0.16
SQLE-206ENST00000523430 A0A0U1RRA0 63 aa14.06□□□□□ -0.16
SQLE-206ENST00000523430 CRPP02741 224 aa14.06□□□□□ -0.16
SQLE-206ENST00000523430 A4D1N5 150 aa14.06□□□□□ -0.16
SQLE-206ENST00000523430 IGLL5B9A064 214 aa14.06□□□□□ -0.16
SQLE-206ENST00000523430 HERV-K104P63124 156 aa14.06□□□□□ -0.16
SQLE-206ENST00000523430 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
SQLE-206ENST00000523430 APOMO95445 188 aa14.05□□□□□ -0.16
SQLE-206ENST00000523430 PRSS2P07478 247 aa14.05□□□□□ -0.16
SQLE-206ENST00000523430 MEIG1Q5JSS6 88 aa14.05□□□□□ -0.16
SQLE-206ENST00000523430 LINC01561Q8N1V8 128 aa14.05□□□□□ -0.16
SQLE-206ENST00000523430 VAMP3Q15836 100 aa14.04□□□□□ -0.16
SQLE-206ENST00000523430 EIF4EBP3O60516 100 aaPredicted RBP14.04□□□□□ -0.16
SQLE-206ENST00000523430 RPL24P83731 157 aaKnown RBP14.04□□□□□ -0.16
SQLE-206ENST00000523430 CIRBPQ14011 172 aaKnown RBP14.04□□□□□ -0.16
SQLE-206ENST00000523430 CFC1BP0CG36 223 aa14.03□□□□□ -0.16
SQLE-206ENST00000523430 CFC1P0CG37 223 aa14.03□□□□□ -0.16
SQLE-206ENST00000523430 LINC01556Q5JQF7 62 aa14.03□□□□□ -0.16
SQLE-206ENST00000523430 LINC00588Q9Y4M8 146 aa14.03□□□□□ -0.16
SQLE-206ENST00000523430 MALP21145 153 aa14.02□□□□□ -0.16
SQLE-206ENST00000523430 Q8IZM0 81 aa14.02□□□□□ -0.16
SQLE-206ENST00000523430 PRKDCP78527 4128 aaKnown RBP14.01□□□□□ -0.17
SQLE-206ENST00000523430 A0A1W2PPM0 123 aa14□□□□□ -0.17
SQLE-206ENST00000523430 C6orf226Q5I0X4 101 aa14□□□□□ -0.17
SQLE-206ENST00000523430 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms