RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 C9JQL5 133 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 TIMM21Q9BVV7 248 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
MRPS28-209ENST00000522987 LPAP08519 4548 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 D6R8Y8 96 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 NDUFA1O15239 70 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 NPYP01303 97 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 OR10D4PQ8NGN7 298 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 SMIM2Q9BVW6 85 aa9.38□□□□□ -0.91
MRPS28-209ENST00000522987 SMIM27A0A1W2PRY6 76 aa9.37□□□□□ -0.91
MRPS28-209ENST00000522987 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
MRPS28-209ENST00000522987 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
MRPS28-209ENST00000522987 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
MRPS28-209ENST00000522987 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
MRPS28-209ENST00000522987 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
MRPS28-209ENST00000522987 HBBP68871 147 aa9.36□□□□□ -0.91
MRPS28-209ENST00000522987 SRSF3P84103 164 aaKnown RBP9.36□□□□□ -0.91
MRPS28-209ENST00000522987 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
MRPS28-209ENST00000522987 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
MRPS28-209ENST00000522987 IMMP2LQ96T52 175 aa9.35□□□□□ -0.91
MRPS28-209ENST00000522987 SPANXA1Q9NS26 97 aa9.35□□□□□ -0.91
MRPS28-209ENST00000522987 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
MRPS28-209ENST00000522987 TRBV24-1A0A075B6N3 115 aa9.34□□□□□ -0.91
MRPS28-209ENST00000522987 C2orf82Q6UX34 121 aa9.34□□□□□ -0.91
MRPS28-209ENST00000522987 H0Y9J4 135 aa9.33□□□□□ -0.92
MRPS28-209ENST00000522987 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
MRPS28-209ENST00000522987 UBE2BP63146 152 aa9.33□□□□□ -0.92
MRPS28-209ENST00000522987 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
MRPS28-209ENST00000522987 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
MRPS28-209ENST00000522987 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
MRPS28-209ENST00000522987 M0QXV9 152 aa9.32□□□□□ -0.92
MRPS28-209ENST00000522987 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
MRPS28-209ENST00000522987 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
MRPS28-209ENST00000522987 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 LOC389332A0A1B0GUA5 103 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 A0A1B0GW15 77 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 F8W036 122 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 IFI27P40305 119 aaPredicted RBP9.3□□□□□ -0.92
MRPS28-209ENST00000522987 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
MRPS28-209ENST00000522987 F8WDY8 70 aa9.29□□□□□ -0.92
MRPS28-209ENST00000522987 RAB5AP20339 215 aa9.29□□□□□ -0.92
MRPS28-209ENST00000522987 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
MRPS28-209ENST00000522987 S100A8P05109 93 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 PEA15Q15121 130 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
MRPS28-209ENST00000522987 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
MRPS28-209ENST00000522987 A0A1B0GVG6 124 aa9.27□□□□□ -0.93
MRPS28-209ENST00000522987 ORMDL3Q8N138 153 aa9.27□□□□□ -0.93
MRPS28-209ENST00000522987 UBE2D1P51668 147 aa9.26□□□□□ -0.93
MRPS28-209ENST00000522987 PRR4Q16378 134 aa9.26□□□□□ -0.93
MRPS28-209ENST00000522987 TMEM141Q96I45 108 aa9.26□□□□□ -0.93
MRPS28-209ENST00000522987 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
MRPS28-209ENST00000522987 PPBPP02775 128 aa9.25□□□□□ -0.93
MRPS28-209ENST00000522987 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
MRPS28-209ENST00000522987 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
MRPS28-209ENST00000522987 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
MRPS28-209ENST00000522987 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
MRPS28-209ENST00000522987 LINC00173Q6ZV60 143 aa9.23□□□□□ -0.93
MRPS28-209ENST00000522987 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
MRPS28-209ENST00000522987 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
MRPS28-209ENST00000522987 PRSS2P07478 247 aa9.22□□□□□ -0.93
MRPS28-209ENST00000522987 C2orf66Q6UXQ4 117 aa9.22□□□□□ -0.93
MRPS28-209ENST00000522987 C2orf88Q9BSF0 95 aa9.22□□□□□ -0.93
MRPS28-209ENST00000522987 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
MRPS28-209ENST00000522987 TSPAN13O95857 204 aa9.21□□□□□ -0.94
MRPS28-209ENST00000522987 CKS1BP61024 79 aa9.21□□□□□ -0.94
MRPS28-209ENST00000522987 CYSLTR1Q9Y271 337 aa9.21□□□□□ -0.94
MRPS28-209ENST00000522987 Q6ZN92 141 aa9.2□□□□□ -0.94
MRPS28-209ENST00000522987 VCX2Q9H322 139 aa9.2□□□□□ -0.94
MRPS28-209ENST00000522987 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
MRPS28-209ENST00000522987 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
MRPS28-209ENST00000522987 Q8N8P6 123 aa9.19□□□□□ -0.94
MRPS28-209ENST00000522987 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
MRPS28-209ENST00000522987 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
MRPS28-209ENST00000522987 AMELXQ99217 191 aa9.18□□□□□ -0.94
MRPS28-209ENST00000522987 CTDSP1Q9GZU7 261 aa9.18□□□□□ -0.94
MRPS28-209ENST00000522987 ZNF861PO60384 105 aa9.17□□□□□ -0.94
MRPS28-209ENST00000522987 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
MRPS28-209ENST00000522987 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
MRPS28-209ENST00000522987 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
MRPS28-209ENST00000522987 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
MRPS28-209ENST00000522987 Q8IZM0 81 aa9.15□□□□□ -0.94
MRPS28-209ENST00000522987 A0A087X002 238 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 IGIPA6NJ69 53 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 RPL37AP8A6NKH3 93 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
MRPS28-209ENST00000522987 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
MRPS28-209ENST00000522987 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms