RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 TYMSOSQ8TAI1 123 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 PPP1R1CQ8WVI7 109 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 HIST1H2BAQ96A08 127 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 ISOC2Q96AB3 205 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 UBE2BP63146 152 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 EIF5AL1Q6IS14 154 aaKnown RBP3.6□□□□□ -1.83
VPS13B-211ENST00000522802 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 LINC00173Q6ZV60 143 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 TPPP3Q9BW30 176 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 NIT2Q9NQR4 276 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
VPS13B-211ENST00000522802 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
VPS13B-211ENST00000522802 MPC2O95563 127 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 ATP6V0CP27449 155 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 DEFA1P59665 94 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 RIGQ13278 110 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 PPDPFQ9H3Y8 114 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 USH2AO75445 5202 aa3.59□□□□□ -1.83
VPS13B-211ENST00000522802 C19orf71A6NCJ1 209 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 CCDC160A6NGH7 325 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 F8WDY8 70 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 ZNF861PO60384 105 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 APCSP02743 223 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 IGLC6P0CF74 106 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 ZNF25P17030 456 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-211ENST00000522802 TAGLN2P37802 199 aaKnown RBP3.58□□□□□ -1.84
VPS13B-211ENST00000522802 AKR1C3P42330 323 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 FHITP49789 147 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
VPS13B-211ENST00000522802 RPL39LQ96EH5 51 aaKnown RBP3.58□□□□□ -1.84
VPS13B-211ENST00000522802 PSMG3Q9BT73 122 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-211ENST00000522802 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-211ENST00000522802 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 COX7A2LO14548 114 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 PET100P0DJ07 73 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 ESDP10768 282 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 SS18Q15532 418 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
VPS13B-211ENST00000522802 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-211ENST00000522802 INMT-MINDY4F8WBC2 141 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 NCR2O95944 276 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 MBP02144 154 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 RGS21Q2M5E4 152 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
VPS13B-211ENST00000522802 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 GATD1Q8NB37 220 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 OR2D3Q8NGH3 330 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 STOML3Q8TAV4 291 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 SMDT1Q9H4I9 107 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 CDC42SE2Q9NRR3 84 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 C6orf48Q9UBA6 75 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 CBY1Q9Y3M2 126 aa3.56□□□□□ -1.84
VPS13B-211ENST00000522802 CTXND1A0A1B0GTU2 59 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 G3V3Q6 166 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 SERF2P84101 59 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
VPS13B-211ENST00000522802 TMUB2Q71RG4 321 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 BTF3L4Q96K17 158 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 NKX6-2Q9C056 277 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-211ENST00000522802 MRPL35Q9NZE8 188 aaKnown RBP3.55□□□□□ -1.84
VPS13B-211ENST00000522802 TNFSF18Q9UNG2 199 aa3.55□□□□□ -1.84
VPS13B-211ENST00000522802 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 MAP1LC3B2A6NCE7 125 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 SDHAF1A6NFY7 115 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 TRGC1P0CF51 173 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 TCEAL7Q9BRU2 100 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 MAP1LC3BQ9GZQ8 125 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 RNASE7Q9H1E1 156 aaKnown RBP3.54□□□□□ -1.84
VPS13B-211ENST00000522802 TMEM242Q9NWH2 141 aa3.54□□□□□ -1.84
VPS13B-211ENST00000522802 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-211ENST00000522802 TRAV13-1A0A0B4J241 112 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 NDUFA1O15239 70 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 CTRLP40313 264 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 LYZL1Q6UWQ5 148 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 MRPL52Q86TS9 123 aaKnown RBP3.53□□□□□ -1.84
VPS13B-211ENST00000522802 LINC00337Q8N6G1 96 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 OR10D4PQ8NGN7 298 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 MRAP2Q96G30 205 aa3.53□□□□□ -1.84
VPS13B-211ENST00000522802 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
VPS13B-211ENST00000522802 NUPR1O60356 82 aa3.52□□□□□ -1.85
VPS13B-211ENST00000522802 RPL28P46779 137 aaKnown RBP3.52□□□□□ -1.85
VPS13B-211ENST00000522802 FOXA3P55318 350 aaPredicted RBP3.52□□□□□ -1.85
VPS13B-211ENST00000522802 RPL7L1Q6DKI1 246 aaKnown RBP3.52□□□□□ -1.85
VPS13B-211ENST00000522802 Q6ZUT4 128 aa3.52□□□□□ -1.85
VPS13B-211ENST00000522802 CCDC32Q9BV29 185 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms