RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
PABPC1-217ENST00000521067 TMEM18Q96B42 140 aa12.36□□□□□ -0.43
PABPC1-217ENST00000521067 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
PABPC1-217ENST00000521067 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
PABPC1-217ENST00000521067 ADIRFQ15847 76 aa12.35□□□□□ -0.43
PABPC1-217ENST00000521067 OR10D4PQ8NGN7 298 aa12.35□□□□□ -0.43
PABPC1-217ENST00000521067 MRPL35Q9NZE8 188 aaKnown RBP12.35□□□□□ -0.43
PABPC1-217ENST00000521067 SRSF3P84103 164 aaKnown RBP12.34□□□□□ -0.43
PABPC1-217ENST00000521067 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
PABPC1-217ENST00000521067 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
PABPC1-217ENST00000521067 SMIM2Q9BVW6 85 aa12.33□□□□□ -0.44
PABPC1-217ENST00000521067 D6R8Y8 96 aa12.32□□□□□ -0.44
PABPC1-217ENST00000521067 TCAPO15273 167 aa12.32□□□□□ -0.44
PABPC1-217ENST00000521067 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
PABPC1-217ENST00000521067 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
PABPC1-217ENST00000521067 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
PABPC1-217ENST00000521067 NPYP01303 97 aa12.31□□□□□ -0.44
PABPC1-217ENST00000521067 IGLV7-43P04211 117 aa12.31□□□□□ -0.44
PABPC1-217ENST00000521067 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
PABPC1-217ENST00000521067 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
PABPC1-217ENST00000521067 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
PABPC1-217ENST00000521067 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
PABPC1-217ENST00000521067 IMMP2LQ96T52 175 aa12.3□□□□□ -0.44
PABPC1-217ENST00000521067 A0A1B0GW15 77 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 F8WDY8 70 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 NDUFA1O15239 70 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 TLX1NBP0CAT3 122 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 KIAA0087Q14695 138 aa12.29□□□□□ -0.44
PABPC1-217ENST00000521067 A0A087WZ39 114 aa12.28□□□□□ -0.44
PABPC1-217ENST00000521067 IFITM10A6NMD0 228 aa12.28□□□□□ -0.44
PABPC1-217ENST00000521067 HBBP68871 147 aa12.27□□□□□ -0.45
PABPC1-217ENST00000521067 GAGE2EQ4V326 116 aa12.26□□□□□ -0.45
PABPC1-217ENST00000521067 FAM19A5Q7Z5A7 132 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-217ENST00000521067 DIRC1Q969H9 104 aa12.26□□□□□ -0.45
PABPC1-217ENST00000521067 GAGE2DQ9UEU5 116 aa12.26□□□□□ -0.45
PABPC1-217ENST00000521067 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
PABPC1-217ENST00000521067 SMDT1Q9H4I9 107 aa12.25□□□□□ -0.45
PABPC1-217ENST00000521067 F8W036 122 aa12.24□□□□□ -0.45
PABPC1-217ENST00000521067 H0Y9J4 135 aa12.24□□□□□ -0.45
PABPC1-217ENST00000521067 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
PABPC1-217ENST00000521067 PEA15Q15121 130 aa12.23□□□□□ -0.45
PABPC1-217ENST00000521067 A0A1B0GVG6 124 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 PPBPP02775 128 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 S100A8P05109 93 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 KRTAP1-4P0C5Y4 121 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 PYGO1Q9Y3Y4 419 aa12.22□□□□□ -0.45
PABPC1-217ENST00000521067 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.45
PABPC1-217ENST00000521067 ORMDL3Q8N138 153 aa12.21□□□□□ -0.45
PABPC1-217ENST00000521067 MUC2Q02817 5179 aa12.2□□□□□ -0.46
PABPC1-217ENST00000521067 RAB5AP20339 215 aa12.2□□□□□ -0.46
PABPC1-217ENST00000521067 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-217ENST00000521067 C9orf129Q5T035 196 aaKnown RBP12.2□□□□□ -0.46
PABPC1-217ENST00000521067 ZC2HC1BQ5TFG8 222 aa12.2□□□□□ -0.46
PABPC1-217ENST00000521067 PRELID3AQ96N28 172 aa12.2□□□□□ -0.46
PABPC1-217ENST00000521067 M0QXV9 152 aa12.18□□□□□ -0.46
PABPC1-217ENST00000521067 TRBV30A0A0K0K1B3 111 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 NDUFC2-KCTD14E9PQ53 114 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 UBE2D1P51668 147 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 TMEM141Q96I45 108 aa12.17□□□□□ -0.46
PABPC1-217ENST00000521067 UBE2BP63146 152 aa12.16□□□□□ -0.46
PABPC1-217ENST00000521067 IGLV1-50A0A075B6I6 118 aa12.15□□□□□ -0.46
PABPC1-217ENST00000521067 LINC00173Q6ZV60 143 aa12.15□□□□□ -0.46
PABPC1-217ENST00000521067 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
PABPC1-217ENST00000521067 TEX43Q6ZNM6 134 aa12.14□□□□□ -0.47
PABPC1-217ENST00000521067 LINC01561Q8N1V8 128 aa12.14□□□□□ -0.47
PABPC1-217ENST00000521067 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-217ENST00000521067 AMELXQ99217 191 aa12.13□□□□□ -0.47
PABPC1-217ENST00000521067 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
PABPC1-217ENST00000521067 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
PABPC1-217ENST00000521067 Q8N8P6 123 aa12.1□□□□□ -0.47
PABPC1-217ENST00000521067 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
PABPC1-217ENST00000521067 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
PABPC1-217ENST00000521067 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
PABPC1-217ENST00000521067 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
PABPC1-217ENST00000521067 VCX2Q9H322 139 aa12.09□□□□□ -0.47
PABPC1-217ENST00000521067 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
PABPC1-217ENST00000521067 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
PABPC1-217ENST00000521067 Q6ZN92 141 aa12.08□□□□□ -0.48
PABPC1-217ENST00000521067 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
PABPC1-217ENST00000521067 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
PABPC1-217ENST00000521067 ZNF861PO60384 105 aa12.07□□□□□ -0.48
PABPC1-217ENST00000521067 XAGE1AQ9HD64 81 aa12.07□□□□□ -0.48
PABPC1-217ENST00000521067 C6orf226Q5I0X4 101 aa12.06□□□□□ -0.48
PABPC1-217ENST00000521067 PRSS2P07478 247 aa12.05□□□□□ -0.48
PABPC1-217ENST00000521067 CKS1BP61024 79 aa12.05□□□□□ -0.48
PABPC1-217ENST00000521067 PRR4Q16378 134 aa12.05□□□□□ -0.48
PABPC1-217ENST00000521067 Q8IZM0 81 aa12.05□□□□□ -0.48
PABPC1-217ENST00000521067 RPL13AP40429 203 aaKnown RBP12.04□□□□□ -0.48
PABPC1-217ENST00000521067 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
PABPC1-217ENST00000521067 ALKBH7Q9BT30 221 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-217ENST00000521067 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
PABPC1-217ENST00000521067 CARHSP1Q9Y2V2 147 aaKnown RBP12.04□□□□□ -0.48
PABPC1-217ENST00000521067 NPSP0C0P6 89 aa12.03□□□□□ -0.48
PABPC1-217ENST00000521067 CTDSP1Q9GZU7 261 aa12.02□□□□□ -0.49
PABPC1-217ENST00000521067 ANAPC16Q96DE5 110 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms