RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 GVQW2A0A096LPI5 108 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-216ENST00000520868 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-216ENST00000520868 RAB19A4D1S5 217 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 TRGC1P0CF51 173 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 NTF3P20783 257 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 RPS20P60866 119 aaKnown RBP3.55□□□□□ -1.84
PABPC1-216ENST00000520868 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
PABPC1-216ENST00000520868 TRAV26-2A0A0B4J265 109 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 F2Z2F3 143 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 G3V3Q6 166 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 SMLR1H3BR10 107 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 IFNA1P01562 189 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 XCL1P47992 114 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 CCL20P78556 96 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 CENPWQ5EE01 88 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 GATD1Q8NB37 220 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 LINC00474Q9P2X8 69 aa3.54□□□□□ -1.84
PABPC1-216ENST00000520868 XKRY2A2RUG3 117 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 FAM231BA6NCW3 169 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 UMAD1C9J7I0 102 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 CCL25O15444 150 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 APCSP02743 223 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 FGF6P10767 208 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 RPL39LQ96EH5 51 aaKnown RBP3.53□□□□□ -1.84
PABPC1-216ENST00000520868 CARD19Q96LW7 228 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 GNG13Q9P2W3 67 aa3.53□□□□□ -1.84
PABPC1-216ENST00000520868 IGHV1-58A0A0C4DH39 117 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 NCR2O95944 276 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 PMCHP20382 165 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 GNG4P50150 75 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 FOXA3P55318 350 aaPredicted RBP3.52□□□□□ -1.85
PABPC1-216ENST00000520868 SYCNQ0VAF6 134 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 C9orf62Q8N4C0 152 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 BTF3L4Q96K17 158 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 MED9Q9NWA0 146 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 PKIGQ9Y2B9 76 aa3.52□□□□□ -1.85
PABPC1-216ENST00000520868 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 I3L3M4 83 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 MT-ND6P03923 174 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 BCL2P10415 239 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 SS18Q15532 418 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 C1orf137Q5JT78 98 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
PABPC1-216ENST00000520868 SMIM15Q7Z3B0 74 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 MANBALQ9NQG1 85 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
PABPC1-216ENST00000520868 KANTRA0A1W2PQU2 76 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 ZNF25P17030 456 aaPredicted RBP3.5□□□□□ -1.85
PABPC1-216ENST00000520868 CTRLP40313 264 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
PABPC1-216ENST00000520868 CD164L2Q6UWJ8 174 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 ZNF664Q8N3J9 261 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 OCC1Q8TAD7 63 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 ISOC2Q96AB3 205 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 CAMK2N2Q96S95 79 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 RNASE7Q9H1E1 156 aaKnown RBP3.5□□□□□ -1.85
PABPC1-216ENST00000520868 BIN3Q9NQY0 253 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 CDC42SE2Q9NRR3 84 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 TMEM242Q9NWH2 141 aa3.5□□□□□ -1.85
PABPC1-216ENST00000520868 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 ESDP10768 282 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 EIF5AP63241 154 aaKnown RBP3.49□□□□□ -1.85
PABPC1-216ENST00000520868 RPL18AQ02543 176 aaKnown RBP3.49□□□□□ -1.85
PABPC1-216ENST00000520868 ZNF345Q14585 488 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 EIF5AL1Q6IS14 154 aaKnown RBP3.49□□□□□ -1.85
PABPC1-216ENST00000520868 TEX261Q6UWH6 196 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 NUP35Q8NFH5 326 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 SMIM12Q96EX1 92 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 CNFNQ9BYD5 112 aa3.49□□□□□ -1.85
PABPC1-216ENST00000520868 RPP21Q9H633 154 aaKnown RBP3.49□□□□□ -1.85
PABPC1-216ENST00000520868 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 TRAV1-1A0A0B4J248 108 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 TRBV6-5A0A0K0K1A5 114 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 HMSDA8MTL9 139 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.48□□□□□ -1.85
PABPC1-216ENST00000520868 TEX46H3BTG2 121 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 K7EN84 100 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 COX7A2LO14548 114 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 PDE6DO43924 150 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 MEF2BQ02080 365 aaPredicted RBP3.48□□□□□ -1.85
PABPC1-216ENST00000520868 PRR4Q16378 134 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
PABPC1-216ENST00000520868 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 DIRC1Q969H9 104 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 MRAP2Q96G30 205 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 DHRS4-AS1Q9P1J3 65 aa3.48□□□□□ -1.85
PABPC1-216ENST00000520868 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms