RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 Q6ZUT4 128 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 CYTL1Q9NRR1 136 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
SRGAP3-212ENST00000520860 CTAG1AP78358 180 aa7.55□□□□□ -1.2
SRGAP3-212ENST00000520860 LBHQ53QV2 105 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-212ENST00000520860 MANBALQ9NQG1 85 aa7.55□□□□□ -1.2
SRGAP3-212ENST00000520860 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 TRBV30A0A0K0K1B3 111 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 BCE1O60756 84 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 H2AFB1P0C5Y9 115 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 RAB14P61106 215 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 GNG13Q9P2W3 67 aa7.54□□□□□ -1.2
SRGAP3-212ENST00000520860 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
SRGAP3-212ENST00000520860 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-212ENST00000520860 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
SRGAP3-212ENST00000520860 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
SRGAP3-212ENST00000520860 TRBV20OR9-2A0A075B6H5 130 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 TEX46H3BTG2 121 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 VCYO14598 125 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 TMEM18Q96B42 140 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
SRGAP3-212ENST00000520860 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
SRGAP3-212ENST00000520860 BLOC1S1P78537 153 aa7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 ALKAL2Q6UX46 152 aa7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 FP248Q71RG6 208 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
SRGAP3-212ENST00000520860 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
SRGAP3-212ENST00000520860 PDE6DO43924 150 aa7.49□□□□□ -1.21
SRGAP3-212ENST00000520860 CFC1BP0CG36 223 aa7.49□□□□□ -1.21
SRGAP3-212ENST00000520860 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
SRGAP3-212ENST00000520860 BORCS7Q96B45 105 aa7.49□□□□□ -1.21
SRGAP3-212ENST00000520860 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
SRGAP3-212ENST00000520860 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-212ENST00000520860 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
SRGAP3-212ENST00000520860 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
SRGAP3-212ENST00000520860 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
SRGAP3-212ENST00000520860 UBE2AP49459 152 aa7.47□□□□□ -1.21
SRGAP3-212ENST00000520860 NDUFA5Q16718 116 aa7.47□□□□□ -1.21
SRGAP3-212ENST00000520860 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
SRGAP3-212ENST00000520860 PPP1R17O96001 155 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 HBBP68871 147 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 IFITM2Q01629 132 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 CLLU1Q5K131 121 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 XAGE1AQ9HD64 81 aa7.46□□□□□ -1.22
SRGAP3-212ENST00000520860 A8MWL6 223 aa7.45□□□□□ -1.22
SRGAP3-212ENST00000520860 K7EN84 100 aa7.45□□□□□ -1.22
SRGAP3-212ENST00000520860 RAB4AP20338 218 aa7.45□□□□□ -1.22
SRGAP3-212ENST00000520860 AMN1Q8IY45 258 aa7.45□□□□□ -1.22
SRGAP3-212ENST00000520860 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
SRGAP3-212ENST00000520860 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-212ENST00000520860 RPL39P62891 51 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-212ENST00000520860 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
SRGAP3-212ENST00000520860 SPANXA1Q9NS26 97 aa7.44□□□□□ -1.22
SRGAP3-212ENST00000520860 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 TAGLN2P37802 199 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 MRPS36P82909 103 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
SRGAP3-212ENST00000520860 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 PRSS2P07478 247 aa7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 MT1HP80294 61 aa7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
SRGAP3-212ENST00000520860 CKS1BP61024 79 aa7.41□□□□□ -1.22
SRGAP3-212ENST00000520860 NRACQ8N912 160 aa7.41□□□□□ -1.22
SRGAP3-212ENST00000520860 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
SRGAP3-212ENST00000520860 GAGE10A6NGK3 116 aa7.4□□□□□ -1.22
SRGAP3-212ENST00000520860 TCAPO15273 167 aa7.4□□□□□ -1.22
SRGAP3-212ENST00000520860 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
SRGAP3-212ENST00000520860 LINC00862A6NCI5 91 aa7.39□□□□□ -1.23
SRGAP3-212ENST00000520860 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
SRGAP3-212ENST00000520860 CT83Q5H943 113 aa7.39□□□□□ -1.23
SRGAP3-212ENST00000520860 TOMM7Q9P0U1 55 aa7.39□□□□□ -1.23
SRGAP3-212ENST00000520860 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 PEA15Q15121 130 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 FAM231DQ6ZW35 169 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 LINC01561Q8N1V8 128 aa7.38□□□□□ -1.23
SRGAP3-212ENST00000520860 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-212ENST00000520860 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
SRGAP3-212ENST00000520860 EIF5A2Q9GZV4 153 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-212ENST00000520860 PNRC1Q12796 327 aaPredicted RBP7.36□□□□□ -1.23
SRGAP3-212ENST00000520860 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms