RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 IGKV2D-24A0A075B6R9 120 aa12.37□□□□□ -0.43
CTNNA1-213ENST00000519113 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-213ENST00000519113 PRSS1P07477 247 aa12.37□□□□□ -0.43
CTNNA1-213ENST00000519113 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-213ENST00000519113 TEX43Q6ZNM6 134 aa12.37□□□□□ -0.43
CTNNA1-213ENST00000519113 COTL1Q14019 142 aa12.36□□□□□ -0.43
CTNNA1-213ENST00000519113 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
CTNNA1-213ENST00000519113 LINC01545Q5VT33 79 aa12.35□□□□□ -0.43
CTNNA1-213ENST00000519113 Q6ZN92 141 aa12.35□□□□□ -0.43
CTNNA1-213ENST00000519113 ERASQ7Z444 233 aa12.35□□□□□ -0.43
CTNNA1-213ENST00000519113 VAMP8Q9BV40 100 aa12.34□□□□□ -0.43
CTNNA1-213ENST00000519113 UBE2D3P61077 147 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 UBE2D2P62837 147 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 C14orf177Q52M58 125 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 KLK12Q9UKR0 248 aa12.33□□□□□ -0.44
CTNNA1-213ENST00000519113 UBE2WQ96B02 151 aa12.32□□□□□ -0.44
CTNNA1-213ENST00000519113 PKHD1L1Q86WI1 4243 aa12.32□□□□□ -0.44
CTNNA1-213ENST00000519113 RPL39P62891 51 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-213ENST00000519113 ATOH7Q8N100 152 aa12.31□□□□□ -0.44
CTNNA1-213ENST00000519113 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
CTNNA1-213ENST00000519113 A0A087WX48 190 aa12.3□□□□□ -0.44
CTNNA1-213ENST00000519113 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
CTNNA1-213ENST00000519113 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CTNNA1-213ENST00000519113 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
CTNNA1-213ENST00000519113 TRAV12-1A0A0B4J245 112 aa12.29□□□□□ -0.44
CTNNA1-213ENST00000519113 HSBP1L1C9JCN9 74 aa12.29□□□□□ -0.44
CTNNA1-213ENST00000519113 PKIAP61925 76 aa12.29□□□□□ -0.44
CTNNA1-213ENST00000519113 ZNF664Q8N3J9 261 aa12.29□□□□□ -0.44
CTNNA1-213ENST00000519113 PAM16Q9Y3D7 125 aa12.29□□□□□ -0.44
CTNNA1-213ENST00000519113 PCP4L1A6NKN8 68 aa12.28□□□□□ -0.44
CTNNA1-213ENST00000519113 HNRNPA3P51991 378 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-213ENST00000519113 TSTD3H0UI37 97 aa12.27□□□□□ -0.45
CTNNA1-213ENST00000519113 ODF1Q14990 250 aa12.27□□□□□ -0.45
CTNNA1-213ENST00000519113 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.45
CTNNA1-213ENST00000519113 SPATA45Q537H7 98 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 PRO1933Q9H354 126 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
CTNNA1-213ENST00000519113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 DPM2O94777 84 aa12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 NPSP0C0P6 89 aa12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 MT1HL1P0DM35 61 aa12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 PMVKQ15126 192 aa12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-213ENST00000519113 IGKCP01834 107 aa12.24□□□□□ -0.45
CTNNA1-213ENST00000519113 Q6ZRU5 148 aa12.24□□□□□ -0.45
CTNNA1-213ENST00000519113 hDV102S1A0JD36 115 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 F8VRH5 84 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 PLNP26678 52 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 MAJINQ3KP22 176 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 TMEM243Q9BU79 118 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 VCX2Q9H322 139 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 CST9LQ9H4G1 147 aa12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
CTNNA1-213ENST00000519113 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
CTNNA1-213ENST00000519113 UBE2L6O14933 153 aa12.22□□□□□ -0.45
CTNNA1-213ENST00000519113 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
CTNNA1-213ENST00000519113 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
CTNNA1-213ENST00000519113 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
CTNNA1-213ENST00000519113 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
CTNNA1-213ENST00000519113 TMEM262E9PQX1 116 aa12.21□□□□□ -0.45
CTNNA1-213ENST00000519113 CRPP02741 224 aa12.21□□□□□ -0.45
CTNNA1-213ENST00000519113 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
CTNNA1-213ENST00000519113 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
CTNNA1-213ENST00000519113 H7C423 109 aa12.2□□□□□ -0.46
CTNNA1-213ENST00000519113 OPRPNQ99935 248 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-213ENST00000519113 LRP2P98164 4655 aa12.2□□□□□ -0.46
CTNNA1-213ENST00000519113 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
CTNNA1-213ENST00000519113 ENHOQ6UWT2 76 aa12.19□□□□□ -0.46
CTNNA1-213ENST00000519113 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
CTNNA1-213ENST00000519113 FGF6P10767 208 aa12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 ZC2HC1BQ5TFG8 222 aa12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 TMEM101Q96IK0 257 aa12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-213ENST00000519113 STPG4Q8N801 248 aa12.17□□□□□ -0.46
CTNNA1-213ENST00000519113 AMELXQ99217 191 aa12.17□□□□□ -0.46
CTNNA1-213ENST00000519113 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
CTNNA1-213ENST00000519113 CSDC2Q9Y534 153 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-213ENST00000519113 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
CTNNA1-213ENST00000519113 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
CTNNA1-213ENST00000519113 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
CTNNA1-213ENST00000519113 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
CTNNA1-213ENST00000519113 ANGP03950 147 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 IGLC3P0DOY3 106 aa12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 DDTP30046 118 aa12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 MIAQ16674 131 aa12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 Q6ZUT4 128 aa12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 UQCR10Q9UDW1 63 aa12.15□□□□□ -0.46
CTNNA1-213ENST00000519113 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 ZNF25P17030 456 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 GAGE6Q13070 117 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms