RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PPP1R17O96001 155 aa7.25□□□□□ -1.25
TRAPPC9-204ENST00000518723 TMEM18Q96B42 140 aa7.25□□□□□ -1.25
TRAPPC9-204ENST00000518723 KIR2DL4Q99706 377 aa7.25□□□□□ -1.25
TRAPPC9-204ENST00000518723 A0A087X002 238 aa7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 SUMO2P61956 95 aaKnown RBP7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 NRACQ8N912 160 aa7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 FAM104AQ969W3 186 aa7.24□□□□□ -1.25
TRAPPC9-204ENST00000518723 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 NUPR1O60356 82 aa7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 KIAA0087Q14695 138 aa7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 C9orf129Q5T035 196 aaKnown RBP7.23□□□□□ -1.25
TRAPPC9-204ENST00000518723 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
TRAPPC9-204ENST00000518723 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
TRAPPC9-204ENST00000518723 PPP1R2P9O14990 202 aa7.22□□□□□ -1.25
TRAPPC9-204ENST00000518723 CRYGAP11844 174 aa7.22□□□□□ -1.25
TRAPPC9-204ENST00000518723 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
TRAPPC9-204ENST00000518723 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
TRAPPC9-204ENST00000518723 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
TRAPPC9-204ENST00000518723 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
TRAPPC9-204ENST00000518723 TCAPO15273 167 aa7.2□□□□□ -1.26
TRAPPC9-204ENST00000518723 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
TRAPPC9-204ENST00000518723 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
TRAPPC9-204ENST00000518723 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 IFITM10A6NMD0 228 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 TMEM250H0YL14 139 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 RPL32P62910 135 aaKnown RBP7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 HBBP68871 147 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 C22orf24Q9Y442 160 aa7.19□□□□□ -1.26
TRAPPC9-204ENST00000518723 RGS21Q2M5E4 152 aa7.18□□□□□ -1.26
TRAPPC9-204ENST00000518723 LBHQ53QV2 105 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC9-204ENST00000518723 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
TRAPPC9-204ENST00000518723 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC9-204ENST00000518723 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
TRAPPC9-204ENST00000518723 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
TRAPPC9-204ENST00000518723 BCE1O60756 84 aa7.17□□□□□ -1.26
TRAPPC9-204ENST00000518723 RIGQ13278 110 aa7.17□□□□□ -1.26
TRAPPC9-204ENST00000518723 LINC00862A6NCI5 91 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 CTAG1AP78358 180 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
TRAPPC9-204ENST00000518723 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 LINC00242Q5T6M2 205 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 FAM104BQ5XKR9 115 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 LINC01551Q86U37 167 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 OSTCQ9NRP0 149 aa7.15□□□□□ -1.26
TRAPPC9-204ENST00000518723 ZNF727A8MUV8 499 aa7.14□□□□□ -1.27
TRAPPC9-204ENST00000518723 LINC00173Q6ZV60 143 aa7.14□□□□□ -1.27
TRAPPC9-204ENST00000518723 SMIM2Q9BVW6 85 aa7.14□□□□□ -1.27
TRAPPC9-204ENST00000518723 BATF3Q9NR55 127 aa7.14□□□□□ -1.27
TRAPPC9-204ENST00000518723 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
TRAPPC9-204ENST00000518723 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
TRAPPC9-204ENST00000518723 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
TRAPPC9-204ENST00000518723 LINC00469Q8N7U9 141 aa7.13□□□□□ -1.27
TRAPPC9-204ENST00000518723 TNFRSF6BO95407 300 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 CKS2P33552 79 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 SLC51BQ86UW2 128 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 XAGE1AQ9HD64 81 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 PYGO1Q9Y3Y4 419 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 V9GYV3 84 aa7.12□□□□□ -1.27
TRAPPC9-204ENST00000518723 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 CEBPGP53567 150 aa7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 SMIM7Q9BQ49 75 aa7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 NAT8BQ9UHF3 227 aa7.11□□□□□ -1.27
TRAPPC9-204ENST00000518723 PRSS2P07478 247 aa7.1□□□□□ -1.27
TRAPPC9-204ENST00000518723 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC9-204ENST00000518723 CKS1BP61024 79 aa7.1□□□□□ -1.27
TRAPPC9-204ENST00000518723 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
TRAPPC9-204ENST00000518723 A0A1B0GW15 77 aa7.09□□□□□ -1.27
TRAPPC9-204ENST00000518723 Q6ZN92 141 aa7.09□□□□□ -1.27
TRAPPC9-204ENST00000518723 Q8IZM0 81 aa7.09□□□□□ -1.27
TRAPPC9-204ENST00000518723 TMEM141Q96I45 108 aa7.09□□□□□ -1.27
TRAPPC9-204ENST00000518723 FAM74A3Q4VXF1 159 aa7.08□□□□□ -1.28
TRAPPC9-204ENST00000518723 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
TRAPPC9-204ENST00000518723 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
TRAPPC9-204ENST00000518723 EIF5A2Q9GZV4 153 aaKnown RBP7.08□□□□□ -1.28
TRAPPC9-204ENST00000518723 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 RPL37AP8A6NKH3 93 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 D6R8Y8 96 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 NPYP01303 97 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 BLOC1S1P78537 153 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 TEX43Q6ZNM6 134 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
TRAPPC9-204ENST00000518723 SMIM27A0A1W2PRY6 76 aa7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 F8VRH5 84 aa7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 PPBPP02775 128 aa7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 RAB5AP20339 215 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms