RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 IGLV1-51P01701 117 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 SFTA3P0C7M3 94 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 ASAH2BP0C7U1 165 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 DEFB103AP81534 67 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 WFDC2Q14508 124 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 FAM229BQ4G0N7 80 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 C1orf134Q5TEV5 83 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 FAM19A2Q8N3H0 131 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 SPTSSBQ8NFR3 76 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 LINC01600Q96MT4 127 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 AMELYQ99218 206 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 HIGD2AQ9BW72 106 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 MANBALQ9NQG1 85 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 PRO1854Q9UHT4 67 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 GOLGA4Q13439 2230 aaKnown RBP1.81□□□□□ -2.12
VPS13B-207ENST00000518569 ASCC3Q8N3C0 2202 aaKnown RBP1.81□□□□□ -2.12
VPS13B-207ENST00000518569 ASXL3Q9C0F0 2248 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 LRBAP50851 2863 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 POLEQ07864 2286 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 SPTA1P02549 2419 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 LAMA4Q16363 1823 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 MYLKQ15746 1914 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 PLXNB3Q9ULL4 1909 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 TRAV10A0A0B4J240 114 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 C16orf90A8MZG2 172 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 C5orf67F2Z3F1 127 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 CLPSP04118 112 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 CFAP126Q5VTH2 177 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 C4orf3Q8WVX3 66 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 TVP23CQ96ET8 276 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 FAM167A-AS1Q96KT0 104 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 LIMD2Q9BT23 127 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 CREBBPQ92793 2442 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 POLQO75417 2590 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 ZFHX3Q15911 3703 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 FLNCQ14315 2725 aa1.8□□□□□ -2.12
VPS13B-207ENST00000518569 UBR5O95071 2799 aaPredicted RBP1.8□□□□□ -2.12
VPS13B-207ENST00000518569 MUC22E2RYF6 1773 aaPredicted RBP1.8□□□□□ -2.12
VPS13B-207ENST00000518569 CITO14578 2027 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 SCN1AP35498 2009 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 NBPF19A0A087WUL8 3843 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 FBN2P35556 2912 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 CELSR1Q9NYQ6 3014 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 BOD1L1Q8NFC6 3051 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV1D-42A0A075B6H8 117 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 A0A1B0GU33 70 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 LOC730098B7Z3J9 87 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 PRB1P04280 392 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 ZNF22P17026 224 aaPredicted RBP1.79□□□□□ -2.12
VPS13B-207ENST00000518569 ERHP84090 104 aaKnown RBP1.79□□□□□ -2.12
VPS13B-207ENST00000518569 KLKP1Q107X0 134 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 ELOBQ15370 118 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 ZNF818PQ6ZRF7 136 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 MYO16Q9Y6X6 1858 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 TNRC6AQ8NDV7 1962 aaKnown RBP1.79□□□□□ -2.12
VPS13B-207ENST00000518569 PCNX2A6NKB5 2137 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 COL6A6A6NMZ7 2263 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 APC2O95996 2303 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 CELSR3Q9NYQ7 3312 aa1.79□□□□□ -2.12
VPS13B-207ENST00000518569 CACNA1EQ15878 2313 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV3D-11A0A0A0MRZ8 115 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 A0A0D9SFI3 127 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 LOC285095A0A1B0GVY8 99 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 HCG22E2RYF7 251 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 DEFA4P12838 97 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 EDDM3BP56851 147 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 ZNF791Q3KP31 576 aaPredicted RBP1.78□□□□□ -2.12
VPS13B-207ENST00000518569 C6orf201Q7Z4U5 140 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 VMO1Q7Z5L0 202 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 Q8NAQ8 132 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 C20orf166-AS1Q96NR2 134 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 C22orf24Q9Y442 160 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 ITPR2Q14571 2701 aa1.78□□□□□ -2.12
VPS13B-207ENST00000518569 SETD2Q9BYW2 2564 aaPredicted RBP1.78□□□□□ -2.12
VPS13B-207ENST00000518569 URB1O60287 2271 aaKnown RBP1.78□□□□□ -2.13
VPS13B-207ENST00000518569 EML6Q6ZMW3 1958 aa1.78□□□□□ -2.13
VPS13B-207ENST00000518569 COL5A1P20908 1838 aaPredicted RBP1.77□□□□□ -2.13
VPS13B-207ENST00000518569 SPTBN1Q01082 2364 aaKnown RBP1.77□□□□□ -2.13
VPS13B-207ENST00000518569 PTPRQQ9UMZ3 2332 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TRBV7-3A0A075B6L6 115 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TRAV12-1A0A0B4J245 112 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 IGKV2-24A0A0C4DH68 120 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 A0A0G2JND7 137 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 A0A0J9YX75 114 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TRBV10-1A0A0K0K1A3 114 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 H7BZZ5 65 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 UBE2D3P61077 147 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 UBE2D2P62837 147 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 ZNF56Q15929 161 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 Q8N6K4 173 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 ODF3Q96PU9 254 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 MINOS1-NBL1R4GNA1 71 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 KIAA1549LQ6ZVL6 1849 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TNRC6BQ9UPQ9 1833 aaKnown RBP1.77□□□□□ -2.13
VPS13B-207ENST00000518569 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
VPS13B-207ENST00000518569 TRBV25-1A0A075B6N4 114 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms