RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 COX19Q49B96 90 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 SVBPQ8N300 66 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 Q8N8P6 123 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 TIMM21Q9BVV7 248 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 UBE2D4Q9Y2X8 147 aa3.98□□□□□ -1.77
MRPS28-203ENST00000518371 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
MRPS28-203ENST00000518371 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 C1orf196B1AJZ1 125 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 RPL39P62891 51 aaKnown RBP3.97□□□□□ -1.77
MRPS28-203ENST00000518371 FABP9Q0Z7S8 132 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
MRPS28-203ENST00000518371 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 GNB1LQ9BYB4 327 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
MRPS28-203ENST00000518371 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
MRPS28-203ENST00000518371 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.96□□□□□ -1.78
MRPS28-203ENST00000518371 MT-ND6P03923 174 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 G0S2P27469 103 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 IFI27P40305 119 aaPredicted RBP3.96□□□□□ -1.78
MRPS28-203ENST00000518371 XGP55808 180 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 HIGD2BQ4VC39 106 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 ORMDL2Q53FV1 153 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 CD164L2Q6UWJ8 174 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 Q6ZUT4 128 aa3.96□□□□□ -1.78
MRPS28-203ENST00000518371 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
MRPS28-203ENST00000518371 TGIF2-C20orf24A0A0A6YYL0 155 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 K7EMI3 77 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 SMR3BP02814 79 aaPredicted RBP3.95□□□□□ -1.78
MRPS28-203ENST00000518371 HAMPP81172 84 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 MRPS36P82909 103 aaKnown RBP3.95□□□□□ -1.78
MRPS28-203ENST00000518371 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 ALKBH7Q9BT30 221 aaPredicted RBP3.95□□□□□ -1.78
MRPS28-203ENST00000518371 CYSLTR1Q9Y271 337 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 TRAPPC1Q9Y5R8 145 aa3.95□□□□□ -1.78
MRPS28-203ENST00000518371 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 IGHV3-64A0A075B6Q5 118 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 IFITM10A6NMD0 228 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 COX7A2LO14548 114 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
MRPS28-203ENST00000518371 Q6ZN92 141 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 TEX43Q6ZNM6 134 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 FA2HQ7L5A8 372 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 C5orf38Q86SI9 138 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 SLC7A5P1Q8MH63 180 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 C15orf56Q8N910 161 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 TMEM141Q96I45 108 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 VCX2Q9H322 139 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 SMCO4Q9NRQ5 59 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 PYGO1Q9Y3Y4 419 aa3.94□□□□□ -1.78
MRPS28-203ENST00000518371 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 GVQW2A0A096LPI5 108 aaPredicted RBP3.93□□□□□ -1.78
MRPS28-203ENST00000518371 APOMO95445 188 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 PAPPA-AS1Q5QFB9 102 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 Q6ZSA8 131 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 LINC00526Q96FQ7 95 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
MRPS28-203ENST00000518371 LINC01549A6NIU2 74 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 NPSP0C0P6 89 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 ZC2HC1BQ5TFG8 222 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 FAM104AQ969W3 186 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 TOMM6Q96B49 74 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 CHAC1Q9BUX1 264 aa3.92□□□□□ -1.78
MRPS28-203ENST00000518371 IGLV4-69A0A075B6H9 119 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 IGHV3OR16-9A0A0B4J2B5 98 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 IGIPA6NJ69 53 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
MRPS28-203ENST00000518371 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 RAB5BP61020 215 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 COX6A2Q02221 97 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 LINC00242Q5T6M2 205 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 Q5VSD8 79 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 ERASQ7Z444 233 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 CBLN2Q8IUK8 224 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 CIRBP-AS1Q8TBR5 109 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 ORAOV1Q8WV07 137 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 CAMK2N2Q96S95 79 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 TIMM17AQ99595 171 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
MRPS28-203ENST00000518371 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
MRPS28-203ENST00000518371 LINC01546A6NGU7 62 aa3.9□□□□□ -1.79
MRPS28-203ENST00000518371 LINC00614P0C842 121 aa3.9□□□□□ -1.79
MRPS28-203ENST00000518371 UBE2D1P51668 147 aa3.9□□□□□ -1.79
MRPS28-203ENST00000518371 SEC11AP67812 179 aa3.9□□□□□ -1.79
MRPS28-203ENST00000518371 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms