RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 NUPR1O60356 82 aa8.64□□□□□ -1.03
PABPC1-205ENST00000518196 GAGE12HA6NDE8 117 aa8.63□□□□□ -1.03
PABPC1-205ENST00000518196 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
PABPC1-205ENST00000518196 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
PABPC1-205ENST00000518196 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 XCL1P47992 114 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 PMVKQ15126 192 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 BAALCQ8WXS3 180 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 IFI27L1Q96BM0 104 aa8.62□□□□□ -1.03
PABPC1-205ENST00000518196 S100A6P06703 90 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 PRSS1P07477 247 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 UBE2D1P51668 147 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 SEC11AP67812 179 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 HSPB8Q9UJY1 196 aa8.61□□□□□ -1.03
PABPC1-205ENST00000518196 FABP4P15090 132 aa8.6□□□□□ -1.03
PABPC1-205ENST00000518196 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
PABPC1-205ENST00000518196 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
PABPC1-205ENST00000518196 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
PABPC1-205ENST00000518196 A0A087WTM6 91 aa8.59□□□□□ -1.03
PABPC1-205ENST00000518196 FOXI1Q12951 378 aa8.59□□□□□ -1.03
PABPC1-205ENST00000518196 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
PABPC1-205ENST00000518196 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
PABPC1-205ENST00000518196 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
PABPC1-205ENST00000518196 COX7A2LO14548 114 aa8.58□□□□□ -1.04
PABPC1-205ENST00000518196 MALP21145 153 aa8.58□□□□□ -1.04
PABPC1-205ENST00000518196 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
PABPC1-205ENST00000518196 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
PABPC1-205ENST00000518196 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-205ENST00000518196 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
PABPC1-205ENST00000518196 RYR3Q15413 4870 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 LECT2O14960 151 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 HERVK_113P63121 156 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 KRTAP19-4Q3LI73 84 aa8.57□□□□□ -1.04
PABPC1-205ENST00000518196 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 APOMO95445 188 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 COX6A2Q02221 97 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 MAP1LC3CQ9BXW4 147 aa8.56□□□□□ -1.04
PABPC1-205ENST00000518196 CHTOPQ9Y3Y2 248 aaKnown RBP8.56□□□□□ -1.04
PABPC1-205ENST00000518196 IGHV1-58A0A0C4DH39 117 aa8.55□□□□□ -1.04
PABPC1-205ENST00000518196 H0Y8G0 127 aa8.55□□□□□ -1.04
PABPC1-205ENST00000518196 S100A2P29034 98 aa8.55□□□□□ -1.04
PABPC1-205ENST00000518196 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
PABPC1-205ENST00000518196 WFDC2Q14508 124 aa8.54□□□□□ -1.04
PABPC1-205ENST00000518196 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
PABPC1-205ENST00000518196 Q8N814 137 aa8.54□□□□□ -1.04
PABPC1-205ENST00000518196 DNAH10Q8IVF4 4471 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 A0A087WZ39 114 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 CHAC1Q9BUX1 264 aa8.53□□□□□ -1.04
PABPC1-205ENST00000518196 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 F8VRH5 84 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 H3BRM9 83 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
PABPC1-205ENST00000518196 C15orf56Q8N910 161 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.05
PABPC1-205ENST00000518196 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-205ENST00000518196 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-205ENST00000518196 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
PABPC1-205ENST00000518196 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
PABPC1-205ENST00000518196 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
PABPC1-205ENST00000518196 C5orf52A6NGY3 159 aa8.5□□□□□ -1.05
PABPC1-205ENST00000518196 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
PABPC1-205ENST00000518196 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
PABPC1-205ENST00000518196 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
PABPC1-205ENST00000518196 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-205ENST00000518196 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
PABPC1-205ENST00000518196 ZNF22P17026 224 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-205ENST00000518196 KRTDAPP60985 99 aa8.49□□□□□ -1.05
PABPC1-205ENST00000518196 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
PABPC1-205ENST00000518196 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
PABPC1-205ENST00000518196 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 B5MCH6 92 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 DPM2O94777 84 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 PLNP26678 52 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 SPAG11BQ08648 103 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
PABPC1-205ENST00000518196 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-205ENST00000518196 F8WDY8 70 aa8.47□□□□□ -1.05
PABPC1-205ENST00000518196 IGKCP01834 107 aa8.47□□□□□ -1.05
PABPC1-205ENST00000518196 PRSS2P07478 247 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms