RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 IGKV1-9A0A0C4DH69 117 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 C20orf202A1L168 122 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 MAP1LC3B2A6NCE7 125 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 PRORSD1PA6NEY8 169 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 MIF4GDA9UHW6 222 aaKnown RBP1.44□□□□□ -2.18
CPNE3-204ENST00000517862 J3QQQ9 107 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 TAX1BP3O14907 124 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 SHBGP04278 402 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 IGKV4-1P06312 121 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 RPSAP08865 295 aaKnown RBP1.44□□□□□ -2.18
CPNE3-204ENST00000517862 TRGC1P0CF51 173 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 ZNF90Q03938 601 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 SLC38A11Q08AI6 406 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 SAMD13Q5VXD3 122 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 LCN15Q6UWW0 184 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 OR4D11Q8NGI4 311 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 TEX47Q8TBZ9 253 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 ADAT3Q96EY9 351 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-204ENST00000517862 BORCS8Q96FH0 119 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 GPER1Q99527 375 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 Q9BRP9 147 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 MAP1LC3BQ9GZQ8 125 aa1.44□□□□□ -2.18
CPNE3-204ENST00000517862 TRBV10-2A0A0K0K1G8 114 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 LOC105371267A0A1B0GV96 52 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 RIIAD1A6NNX1 92 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 E7EUB6 86 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 AIPO00170 330 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 YPEL1O60688 119 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 TMEM258P61165 79 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 KHDC3LQ587J8 217 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 KTN1-AS1Q86SY8 53 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 CTAGE3PQ8IX95 158 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 CARD19Q96LW7 228 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 YPEL2Q96QA6 119 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 MRPL57Q9BQC6 102 aaKnown RBP1.43□□□□□ -2.18
CPNE3-204ENST00000517862 IMUPQ9GZP8 106 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 NDUFA12Q9UI09 145 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 TRAPPC2LQ9UL33 140 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 BAIAP2Q9UQB8 552 aa1.43□□□□□ -2.18
CPNE3-204ENST00000517862 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 HMSDA8MTL9 139 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 M0R378 163 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 Q0VG73 95 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 LZICQ8WZA0 190 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 TMEM203Q969S6 136 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 TIMM21Q9BVV7 248 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 CKLFQ9UBR5 152 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 JPT1Q9UK76 154 aa1.42□□□□□ -2.18
CPNE3-204ENST00000517862 A0A1W2PRE2 83 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 MEIS3P1A6NDR6 274 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 H7BYZ3 331 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 OR10J4P0C629 311 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 UBBP0CG47 229 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 S100GP29377 79 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 RNASE4P34096 147 aaKnown RBP1.41□□□□□ -2.18
CPNE3-204ENST00000517862 RBP2P50120 134 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 FXYD2P54710 66 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 YPEL3P61236 119 aaPredicted RBP1.41□□□□□ -2.18
CPNE3-204ENST00000517862 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 TMEM78Q5T7P6 136 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 Q6ZQT0 140 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 OR4K15Q8NH41 348 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 PPP3R2Q96LZ3 170 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 HIST1H2BLQ99880 126 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 TAF9BQ9HBM6 251 aa1.41□□□□□ -2.18
CPNE3-204ENST00000517862 A8MTW9 85 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 H3BQF6 201 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 TMEM256-PLSCR3K7ERE1 68 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 CDC42EP2O14613 210 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 PMP2P02689 132 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 CXCL1P09341 107 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 SAA1P0DJI8 122 aaPredicted RBP1.4□□□□□ -2.19
CPNE3-204ENST00000517862 NFYAP23511 347 aaPredicted RBP1.4□□□□□ -2.19
CPNE3-204ENST00000517862 UBE2D3P61077 147 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 MSMO1Q15800 293 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 SCGB2B2Q4G0G5 96 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 EIF5AL1Q6IS14 154 aaKnown RBP1.4□□□□□ -2.19
CPNE3-204ENST00000517862 SOSTDC1Q6X4U4 206 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 PHF5AQ7RTV0 110 aaKnown RBP1.4□□□□□ -2.19
CPNE3-204ENST00000517862 MBD3L1Q8WWY6 194 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 GPX7Q96SL4 187 aaPredicted RBP1.4□□□□□ -2.19
CPNE3-204ENST00000517862 OR52A1Q9UKL2 312 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 V9GYS6 101 aa1.4□□□□□ -2.19
CPNE3-204ENST00000517862 H3BRN7 92 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 CRPP02741 224 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 MT1BP07438 61 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 NBEAP1P0C6P0 100 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 SFTA3P0C7M3 94 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 S100A3P33764 101 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 TMBIM6P55061 237 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 MYL5Q02045 173 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 ZNF345Q14585 488 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 ELOBQ15370 118 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 SURF2Q15527 256 aaPredicted RBP1.39□□□□□ -2.19
CPNE3-204ENST00000517862 TMEM128Q5BJH2 165 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 BCL2L15Q5TBC7 163 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.39□□□□□ -2.19
CPNE3-204ENST00000517862 PLEKHB2Q96CS7 222 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms