RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 COX19Q49B96 90 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 A0A087WYN8 130 aa6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 MRPL51Q4U2R6 128 aaKnown RBP6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 LINC00518Q8N0U6 118 aa6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 C20orf78Q9BR46 151 aa6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
PDGFRB-203ENST00000517660 MT-ND6P03923 174 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 SMIM6P0DI80 62 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 CKS2P33552 79 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 COX6A2Q02221 97 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
PDGFRB-203ENST00000517660 RPL32P62910 135 aaKnown RBP6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 HBBP68871 147 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 PDZD11Q5EBL8 140 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 HIST3H2BBQ8N257 126 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 C12orf57Q99622 126 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 GNB1LQ9BYB4 327 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
PDGFRB-203ENST00000517660 TCAPO15273 167 aa6.69□□□□□ -1.34
PDGFRB-203ENST00000517660 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
PDGFRB-203ENST00000517660 MAJINQ3KP22 176 aa6.69□□□□□ -1.34
PDGFRB-203ENST00000517660 TIMM21Q9BVV7 248 aa6.69□□□□□ -1.34
PDGFRB-203ENST00000517660 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
PDGFRB-203ENST00000517660 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 PPBPP02775 128 aa6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 FABP4P15090 132 aa6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 HNRNPA3P51991 378 aaKnown RBP6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
PDGFRB-203ENST00000517660 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 IFITM10A6NMD0 228 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 D6R8Y8 96 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 COX7A2LO14548 114 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 MALP21145 153 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 TMEM136Q6ZRR5 245 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 OR10D4PQ8NGN7 298 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 SMIM2Q9BVW6 85 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 LPAP08519 4548 aa6.67□□□□□ -1.34
PDGFRB-203ENST00000517660 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
PDGFRB-203ENST00000517660 Q6ZRU5 148 aa6.66□□□□□ -1.34
PDGFRB-203ENST00000517660 STPG4Q8N801 248 aa6.66□□□□□ -1.34
PDGFRB-203ENST00000517660 PACRGQ96M98 296 aaPredicted RBP6.66□□□□□ -1.34
PDGFRB-203ENST00000517660 A0A096LNI7 61 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 NPYP01303 97 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 Q6ZUT4 128 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 ORMDL3Q8N138 153 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 HIST1H2BLQ99880 126 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
PDGFRB-203ENST00000517660 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 PCP4L1A6NKN8 68 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 APOMO95445 188 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 RPL39P62891 51 aaKnown RBP6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 C5orf38Q86SI9 138 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 PRELID3AQ96N28 172 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 MUC2Q02817 5179 aa6.64□□□□□ -1.35
PDGFRB-203ENST00000517660 MRPS36P82909 103 aaKnown RBP6.63□□□□□ -1.35
PDGFRB-203ENST00000517660 FAM104AQ969W3 186 aa6.63□□□□□ -1.35
PDGFRB-203ENST00000517660 CAMK2N2Q96S95 79 aa6.63□□□□□ -1.35
PDGFRB-203ENST00000517660 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
PDGFRB-203ENST00000517660 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
PDGFRB-203ENST00000517660 SERF1AO75920 110 aa6.62□□□□□ -1.35
PDGFRB-203ENST00000517660 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
PDGFRB-203ENST00000517660 LAMTOR2Q9Y2Q5 125 aa6.62□□□□□ -1.35
PDGFRB-203ENST00000517660 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 GAGE2BQ13066 116 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 ODF1Q14990 250 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 RNF151Q2KHN1 245 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
PDGFRB-203ENST00000517660 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 F8WDY8 70 aa6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 IFI27P40305 119 aaPredicted RBP6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 PRR3P79522 188 aaKnown RBP6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 S100A12P80511 92 aa6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
PDGFRB-203ENST00000517660 LOC389332A0A1B0GUA5 103 aa6.59□□□□□ -1.35
PDGFRB-203ENST00000517660 JOSD1Q15040 202 aaPredicted RBP6.59□□□□□ -1.35
PDGFRB-203ENST00000517660 Q8N8P6 123 aa6.59□□□□□ -1.35
PDGFRB-203ENST00000517660 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms