RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PANO1I0J062 215 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 BCL2L11O43521 198 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 XCL1P47992 114 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 ZNF345Q14585 488 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SS18Q15532 418 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C1orf195Q5TG92 126 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 OR5A1Q8NGJ0 315 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SPACA4Q8TDM5 124 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C14orf144Q96I85 54 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 KIF25-AS1Q9Y6Z4 181 aa4.69□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CCL20P78556 96 aa4.68□□□□□ -1.66
TNFRSF11B-202ENST00000517352 MEF2BQ02080 365 aaPredicted RBP4.68□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
TNFRSF11B-202ENST00000517352 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
TNFRSF11B-202ENST00000517352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 TRAV26-2A0A0B4J265 109 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 HMSDA8MTL9 139 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 H7C423 109 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 NCR2O95944 276 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 IGLC6P0CF74 106 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 FGF6P10767 208 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 RAB5AP20339 215 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PMVKQ15126 192 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C9orf62Q8N4C0 152 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PLAC8Q9NZF1 115 aa4.67□□□□□ -1.66
TNFRSF11B-202ENST00000517352 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 I3L3M4 83 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 K7ERU9 68 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 FCER1GP30273 86 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SPINK6Q6UWN8 80 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 Q6ZRP5 223 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C11orf52Q96A22 123 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 GFRA4Q9GZZ7 299 aa4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 RPP21Q9H633 154 aaKnown RBP4.66□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CCL25O15444 150 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 MT-ND6P03923 174 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 SLPIP03973 132 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 PRR3P79522 188 aaKnown RBP4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 SYCNQ0VAF6 134 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 Q6ZNX1 250 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C15orf56Q8N910 161 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 ST20Q9HBF5 79 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 SPANXCQ9NY87 97 aa4.65□□□□□ -1.67
TNFRSF11B-202ENST00000517352 A0A096LNI7 61 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 GVQW2A0A096LPI5 108 aaPredicted RBP4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TRAV1-1A0A0B4J248 108 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 FAM240AA0A1B0GVK7 77 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 A8MWL6 223 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 SMKR1H3BMG3 65 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 APOMO95445 188 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 BCL2P10415 239 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RPL39LQ96EH5 51 aaKnown RBP4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CAMK2N2Q96S95 79 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RNASE7Q9H1E1 156 aaKnown RBP4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RNF213Q63HN8 5207 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 A0A087WZ39 114 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LOC107984640A0A0U1RRK4 108 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CTRLP40313 264 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 IFITM2Q01629 132 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RPL18AQ02543 176 aaKnown RBP4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 ZNF664Q8N3J9 261 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C7orf77A4D0Y5 90 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C1orf196B1AJZ1 125 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 G3V3Q6 166 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 COX7A2LO14548 114 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 PPP1R17O96001 155 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 FOXI1Q12951 378 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 Q6ZVQ6 151 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 FA2HQ7L5A8 372 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 KIR2DL4Q99706 377 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TMEM242Q9NWH2 141 aa4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CARHSP1Q9Y2V2 147 aaKnown RBP4.62□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TRBV20OR9-2A0A075B6H5 130 aa4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 IGLV4-69A0A075B6H9 119 aa4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TRAV13-1A0A0B4J241 112 aa4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 ESDP10768 282 aa4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RIGQ13278 110 aa4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C1orf137Q5JT78 98 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms