RNA–Protein interactions for RNA: ENST00000516539.1

RNU6-1256P-201, Transcript of RNA, U6 small nuclear 1256, pseudogene, humanhuman

BASIC

Gene RNU6-1256P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1256P-201ENST00000516539 PMCHL1Q16048 86 aa0.6□□□□□ -2.31
RNU6-1256P-201ENST00000516539 PRO1933Q9H354 126 aa0.6□□□□□ -2.31
RNU6-1256P-201ENST00000516539 MAGI1Q96QZ7 1491 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1256P-201ENST00000516539 MLH3Q9UHC1 1453 aa0.6□□□□□ -2.31
RNU6-1256P-201ENST00000516539 LRP6O75581 1613 aa0.6□□□□□ -2.31
RNU6-1256P-201ENST00000516539 COL4A6Q14031 1691 aa0.59□□□□□ -2.31
RNU6-1256P-201ENST00000516539 C10orf142B7Z368 130 aa0.59□□□□□ -2.31
RNU6-1256P-201ENST00000516539 C10orf113Q5VZT2 155 aa0.59□□□□□ -2.31
RNU6-1256P-201ENST00000516539 FAM208BQ5VWN6 2430 aa0.59□□□□□ -2.32
RNU6-1256P-201ENST00000516539 CACNA1EQ15878 2313 aa0.59□□□□□ -2.32
RNU6-1256P-201ENST00000516539 FRAS1Q86XX4 4008 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 A0A0G2JND7 137 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 H7BZZ5 65 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 UQCRHP07919 91 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 SMR3AQ99954 134 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ADGRL2O95490 1459 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ANKRD26Q9UPS8 1709 aa0.58□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TRBV6-1A0A0K0K1D8 114 aa0.57□□□□□ -2.32
RNU6-1256P-201ENST00000516539 FAUP35544 74 aaKnown RBP0.57□□□□□ -2.32
RNU6-1256P-201ENST00000516539 Q9H521 79 aa0.57□□□□□ -2.32
RNU6-1256P-201ENST00000516539 PRO0255Q9UI72 69 aa0.57□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TRBV7-7A0A0K0K1E9 115 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 C7orf77A4D0Y5 90 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 GYPAP02724 150 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 PSMG4Q5JS54 123 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TP53AIP1Q9HCN2 124 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TTC28Q96AY4 2481 aa0.56□□□□□ -2.32
RNU6-1256P-201ENST00000516539 NUP188Q5SRE5 1749 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 PLCE1Q9P212 2302 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 GOLGA4Q13439 2230 aaKnown RBP0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 UQCRHLA0A096LP55 91 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 SYS1-DBNDD2H3BUS1 97 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 PIGYQ3MUY2 71 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 Q5BKY6 102 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 FDCSPQ8NFU4 85 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 V9GYS6 101 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 SCN7AQ01118 1682 aa0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TROQ12816 1431 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1256P-201ENST00000516539 POLA1P09884 1462 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 BDP1A6H8Y1 2624 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 LAMC1P11047 1609 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 HMGN3Q15651 99 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 Q8IZM0 81 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 RAPGEF2Q9Y4G8 1499 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ABCC2Q92887 1545 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ARHGEF12Q9NZN5 1544 aa0.54□□□□□ -2.32
RNU6-1256P-201ENST00000516539 F8P00451 2351 aa0.53□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ALKAL2Q6UX46 152 aa0.53□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ZNF720Q7Z2F6 126 aa0.53□□□□□ -2.32
RNU6-1256P-201ENST00000516539 LINC01600Q96MT4 127 aa0.53□□□□□ -2.32
RNU6-1256P-201ENST00000516539 ABCA12Q86UK0 2595 aa0.53□□□□□ -2.32
RNU6-1256P-201ENST00000516539 TPRP12270 2363 aaKnown RBP0.53□□□□□ -2.33
RNU6-1256P-201ENST00000516539 MARF1Q9Y4F3 1742 aaKnown RBP0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 MYH4Q9Y623 1939 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 CELSR2Q9HCU4 2923 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 TRBV7-4A0A0J9YYF1 115 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 H3BQF6 201 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 I3L2K1 104 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 SPINK1P00995 79 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 C1orf167Q5SNV9 1468 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 TTC37Q6PGP7 1564 aa0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 CLTCQ00610 1675 aaKnown RBP0.52□□□□□ -2.33
RNU6-1256P-201ENST00000516539 A0A087WVE0 104 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 EPRSP07814 1512 aaKnown RBP0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 ARMS2P0C7Q2 107 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 SMARCA2P51531 1590 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 SMIM11AP58511 58 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 PYY3Q5JQD4 70 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 KRTAP5-10Q6L8G5 202 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 BIVM-ERCC5R4GMW8 1640 aa0.51□□□□□ -2.33
RNU6-1256P-201ENST00000516539 DNAJC13O75165 2243 aa0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 PAPPAQ13219 1627 aa0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 BAZ1AQ9NRL2 1556 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 PLEKHH2Q8IVE3 1493 aa0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 LCN9Q8WX39 176 aa0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 A0A0G2JMZ2 1700 aa0.5□□□□□ -2.33
RNU6-1256P-201ENST00000516539 C2CD3Q4AC94 2353 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 DOPEY2Q9Y3R5 2298 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 ANKRD36A6QL64 1941 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 GNG2P59768 71 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 ETDBQ3ZM63 59 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 DEFB123Q8N688 67 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 USF3Q68DE3 2245 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 NHSL1Q5SYE7 1610 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 SETBP1Q9Y6X0 1596 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 POLQO75417 2590 aa0.49□□□□□ -2.33
RNU6-1256P-201ENST00000516539 FANCAO15360 1455 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 IQSEC2Q5JU85 1478 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 RGPD4Q7Z3J3 1758 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 XRN1Q8IZH2 1706 aaKnown RBP0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 PVALEFA0A1B0GWK0 134 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 H0Y9P7 68 aa0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
RNU6-1256P-201ENST00000516539 WFDC2Q14508 124 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms