RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 C9orf16Q9BUW7 83 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 HIGD2AQ9BW72 106 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 NPCDR1Q9BY65 106 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 RNASE7Q9H1E1 156 aaKnown RBP0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 ALG5Q9Y673 324 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 ARL2-SNX15V9GYD0 113 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 IGLV9-49A0A0B4J1Y8 123 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 SERTM2A0A1B0GWG4 89 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 SSSCA1O60232 199 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 IGLC6P0CF74 106 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 VPREB1P12018 145 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 PCP4P48539 62 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 POLR2KP53803 58 aaKnown RBP0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 IL15RAQ13261 267 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 IAH1Q2TAA2 248 aaPredicted RBP0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 RNASE13Q5GAN3 156 aaKnown RBP0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 SPANXN2Q5MJ10 180 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 AMMECR1LQ6DCA0 310 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 MZT2BQ6NZ67 158 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 URB1-AS1Q96HZ7 61 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 CYSTM1Q9H1C7 97 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 EPDR1Q9UM22 224 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 KCNIP3Q9Y2W7 256 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 PAM16Q9Y3D7 125 aa0.89□□□□□ -2.27
RNU1-48P-201ENST00000516400 FXYD6-FXYD2A0A087WZ82 144 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 TMSB15BA0A087X1C1 80 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM236DA0A1B0GTK5 79 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 RAB3DO95716 219 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 SCGB1D2O95969 90 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 MT1EP04732 61 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM236CP0DP71 79 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 CD164Q04900 197 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 SCGB2B2Q4G0G5 96 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 DNAL1Q4LDG9 190 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 TMEM128Q5BJH2 165 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 SNX29P2Q8IUI4 249 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 PACRGLQ8N7B6 248 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 SAMD12Q8N8I0 201 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 C5orf17Q8NAS9 161 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 RPL39LQ96EH5 51 aaKnown RBP0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 Q9BRP9 147 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 LIMD2Q9BT23 127 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 KRTAP4-3Q9BYR4 195 aa0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 C14orf166Q9Y224 244 aaKnown RBP0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 ZNF706Q9Y5V0 76 aaPredicted RBP0.88□□□□□ -2.27
RNU1-48P-201ENST00000516400 TRAV13-1A0A0B4J241 112 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 TRBV6-5A0A0K0K1A5 114 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 IGSF23A1L1A6 192 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 SDHAF1A6NFY7 115 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 IFITM10A6NMD0 228 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 OR7C2O60412 319 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 CIB2O75838 187 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 APOA1P02647 267 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 APCSP02743 223 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 UBE2L3P68036 154 aaKnown RBP0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 GAGE2AQ6NT46 116 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 C8orf59Q8N0T1 100 aaPredicted RBP0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 LINC01561Q8N1V8 128 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 CMTM2Q8TAZ6 248 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 NDFIP1Q9BT67 221 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 CCDC32Q9BV29 185 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 TMEM242Q9NWH2 141 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 SCN3BQ9NY72 215 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 GSKIPQ9P0R6 139 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 RBM12B-AS1Q9P1G2 102 aa0.87□□□□□ -2.27
RNU1-48P-201ENST00000516400 TRBV27A0A0K0K1C4 114 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 UBE2L5PA0A1B0GUS4 154 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 KRTAP9-6A8MVA2 160 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 SFT2D2O95562 160 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 LTAP01374 205 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 MT1GP13640 62 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 SPRR1BP22528 89 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 DEFA3P59666 94 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 C1orf146Q5VVC0 180 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 HRCT1Q6UXD1 115 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 Q6ZUT4 128 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 FMC1Q96HJ9 113 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 TMEM101Q96IK0 257 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM210AQ96ND0 272 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 TIMM21Q9BVV7 248 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 WDR61Q9GZS3 305 aaKnown RBP0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 PYGO1Q9Y3Y4 419 aa0.86□□□□□ -2.27
RNU1-48P-201ENST00000516400 ANKRD20A5PA0PJZ0 165 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 I3L3M4 83 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 STAG3L2P0CL84 134 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 STAG3L3P0CL85 134 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 S100A11P31949 105 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 SULT1A1P50225 295 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 NCS1P62166 190 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 SSBP1Q04837 148 aaKnown RBP0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 BAXQ07812 192 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 KHDC3LQ587J8 217 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM74A1Q5RGS3 127 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 SPANXN1Q5VSR9 72 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 ALKAL2Q6UX46 152 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 PQLC2Q6ZP29 291 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 Q8IZM0 81 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 MT1MQ8N339 61 aa0.85□□□□□ -2.27
RNU1-48P-201ENST00000516400 TMEM18Q96B42 140 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms