RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 RIMS1Q86UR5 1692 aaKnown RBP-1.63□□□□□ -2.67
SNORA40.9-201ENST00000515895 RAPGEF6Q8TEU7 1601 aa-1.63□□□□□ -2.67
SNORA40.9-201ENST00000515895 FAT3Q8TDW7 4589 aa-1.63□□□□□ -2.67
SNORA40.9-201ENST00000515895 HMGXB3Q12766 1538 aa-1.64□□□□□ -2.67
SNORA40.9-201ENST00000515895 ARPC5O15511 151 aa-1.64□□□□□ -2.67
SNORA40.9-201ENST00000515895 MGST2Q99735 147 aa-1.64□□□□□ -2.67
SNORA40.9-201ENST00000515895 SETBP1Q9Y6X0 1596 aa-1.64□□□□□ -2.67
SNORA40.9-201ENST00000515895 MYOM3Q5VTT5 1437 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 HMGN4O00479 90 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 SFT2D2O95562 160 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 C10orf113Q5VZT2 155 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 C9orf62Q8N4C0 152 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 NAA60Q9H7X0 242 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 ANKRD30AQ9BXX3 1397 aa-1.65□□□□□ -2.67
SNORA40.9-201ENST00000515895 DMXL1Q9Y485 3027 aa-1.66□□□□□ -2.67
SNORA40.9-201ENST00000515895 ANKRD11Q6UB99 2663 aaPredicted RBP-1.66□□□□□ -2.67
SNORA40.9-201ENST00000515895 TRBV7-3A0A075B6L6 115 aa-1.66□□□□□ -2.68
SNORA40.9-201ENST00000515895 MGPP08493 103 aa-1.66□□□□□ -2.68
SNORA40.9-201ENST00000515895 CKS1BP61024 79 aa-1.66□□□□□ -2.68
SNORA40.9-201ENST00000515895 SELENOSQ9BQE4 189 aa-1.66□□□□□ -2.68
SNORA40.9-201ENST00000515895 SPEF2Q9C093 1822 aa-1.66□□□□□ -2.68
SNORA40.9-201ENST00000515895 ZFHX3Q15911 3703 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 RYR3Q15413 4870 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 DNAH9Q9NYC9 4486 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 LOC285095A0A1B0GVY8 99 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 SCGB1A1P11684 91 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 B2MP61769 119 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 C12orf73Q69YU5 71 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 Q8N8P6 123 aa-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 LAMA2P24043 3122 aaKnown RBP-1.67□□□□□ -2.68
SNORA40.9-201ENST00000515895 MAGI1Q96QZ7 1491 aaPredicted RBP-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 CUBNO60494 3623 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 FMN2Q9NZ56 1722 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 MT1AP04731 61 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 H1FX-AS1Q4G0G2 97 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 TCEAL4Q96EI5 215 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 DPH3Q96FX2 82 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 SPRR4Q96PI1 79 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 TMEM191AQ9H0A3 160 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 BIRC6Q9NR09 4857 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 FHAD1B1AJZ9 1412 aa-1.68□□□□□ -2.68
SNORA40.9-201ENST00000515895 HIST1H1DP16402 221 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 UBA52P62987 128 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 SMCO1Q147U7 214 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 MRPL54Q6P161 138 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 FDCSPQ8NFU4 85 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 TSLPQ969D9 159 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 TPT1P8Q9HAU6 139 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 BTAF1O14981 1849 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 KALRNO60229 2985 aa-1.69□□□□□ -2.68
SNORA40.9-201ENST00000515895 RYR1P21817 5038 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 COPZ1P61923 177 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 TSTD1Q8NFU3 115 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 LINC01600Q96MT4 127 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 FAIMQ9NVQ4 179 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 CCDC167Q9P0B6 97 aa-1.7□□□□□ -2.68
SNORA40.9-201ENST00000515895 PAPPA2Q9BXP8 1791 aa-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 IGLC1P0CG04 106 aa-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 S100A5P33763 92 aa-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 RPS25P62851 125 aaKnown RBP-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 NXT2Q9NPJ8 142 aaKnown RBP-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 ACACAQ13085 2346 aa-1.71□□□□□ -2.68
SNORA40.9-201ENST00000515895 SSSCA1O60232 199 aa-1.72□□□□□ -2.68
SNORA40.9-201ENST00000515895 WHAMMP3Q1A5X7 153 aa-1.72□□□□□ -2.68
SNORA40.9-201ENST00000515895 COPS9Q8WXC6 57 aa-1.72□□□□□ -2.68
SNORA40.9-201ENST00000515895 LSM10Q969L4 123 aaKnown RBP-1.72□□□□□ -2.68
SNORA40.9-201ENST00000515895 PDCD10Q9BUL8 212 aa-1.72□□□□□ -2.68
SNORA40.9-201ENST00000515895 PSME4Q14997 1843 aa-1.73□□□□□ -2.69
SNORA40.9-201ENST00000515895 KIAA1109Q2LD37 5005 aa-1.73□□□□□ -2.69
SNORA40.9-201ENST00000515895 LYSTQ99698 3801 aa-1.74□□□□□ -2.69
SNORA40.9-201ENST00000515895 H0YGG7 62 aa-1.74□□□□□ -2.69
SNORA40.9-201ENST00000515895 FAM167A-AS1Q96KT0 104 aa-1.74□□□□□ -2.69
SNORA40.9-201ENST00000515895 TEX15Q9BXT5 2789 aa-1.74□□□□□ -2.69
SNORA40.9-201ENST00000515895 CFTRP13569 1480 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 MGAM2Q2M2H8 2515 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 CHKB-CPT1BH3BT56 60 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 LZICQ8WZA0 190 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 SERP1Q9Y6X1 66 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 MYOM1P52179 1685 aa-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 NIPBLQ6KC79 2804 aaeCLIP-1.75□□□□□ -2.69
SNORA40.9-201ENST00000515895 AKAP14Q86UN6 197 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 SPANXDQ9BXN6 97 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 PRO1933Q9H354 126 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 RERGLQ9H628 205 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 COPZ2Q9P299 210 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 ADAMTS12P58397 1594 aa-1.76□□□□□ -2.69
SNORA40.9-201ENST00000515895 PTPN23Q9H3S7 1636 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 PDE4DIPQ5VU43 2346 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 WDR87Q6ZQQ6 2873 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 NBEAQ8NFP9 2946 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 FAM223AQ8IWN6 122 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 MYOZ3Q8TDC0 251 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 LCN9Q8WX39 176 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 PPP3R2Q96LZ3 170 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 CRIPTQ9P021 101 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 ARL2-SNX15V9GYD0 113 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 NKTRP30414 1462 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 CCDC141Q6ZP82 1450 aa-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 UTP20O75691 2785 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.9-201ENST00000515895 A0A0G2JMZ2 1700 aa-1.77□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 360.7 ms