RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 MGPP08493 103 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 KLK9Q2XQG4 91 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 KRTAP19-8Q3LI54 63 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 C10orf113Q5VZT2 155 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 DEFB105AQ8NG35 78 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 HERC1Q15751 4861 aa-1.03□□□□□ -2.57
CXXC4-203ENST00000515509 GOLGA4Q13439 2230 aaKnown RBP-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 LINC00959A0A1B0GUT2 108 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 SSSCA1O60232 199 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 CATR1Q13166 79 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 COMMD6Q7Z4G1 85 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 C5orf38Q86SI9 138 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 LINC00474Q9P2X8 69 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 BTAF1O14981 1849 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 FOCADQ5VW36 1801 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 STAB2Q8WWQ8 2551 aa-1.04□□□□□ -2.58
CXXC4-203ENST00000515509 MAGI1Q96QZ7 1491 aaPredicted RBP-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 CNOT1A5YKK6 2376 aaKnown RBP-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 C8orf59Q8N0T1 100 aaPredicted RBP-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 NXT2Q9NPJ8 142 aaKnown RBP-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 SVEP1Q4LDE5 3571 aa-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 URB1O60287 2271 aaKnown RBP-1.05□□□□□ -2.58
CXXC4-203ENST00000515509 SMG6Q86US8 1419 aaKnown RBP-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 KIAA0556O60303 1618 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 CHKB-CPT1BH3BT56 60 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 APOC2P02655 101 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 IGLC1P0CG04 106 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 MYOZ3Q8TDC0 251 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 CDC42SE2Q9NRR3 84 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 NEBP20929 6669 aa-1.06□□□□□ -2.58
CXXC4-203ENST00000515509 PCLOQ9Y6V0 5065 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 LOC100130705A0A1B0GUX0 176 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 NDUFA2O43678 99 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 SPRR2AP35326 72 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 KRTAP6-2Q3LI66 62 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 FAIMQ9NVQ4 179 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 ROBO1Q9Y6N7 1651 aa-1.07□□□□□ -2.58
CXXC4-203ENST00000515509 ZFHX3Q15911 3703 aa-1.08□□□□□ -2.58
CXXC4-203ENST00000515509 FGF7P21781 194 aa-1.08□□□□□ -2.58
CXXC4-203ENST00000515509 TET3O43151 1660 aa-1.08□□□□□ -2.58
CXXC4-203ENST00000515509 QRICH2Q9H0J4 1663 aa-1.08□□□□□ -2.58
CXXC4-203ENST00000515509 HMGXB3Q12766 1538 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 DNAJC13O75165 2243 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 IFNGP01579 166 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 UBA52P62987 128 aaKnown RBP-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 CCDC58Q4VC31 144 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 FAM223AQ8IWN6 122 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 LINC01600Q96MT4 127 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 NAIPQ13075 1403 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 LAMA5O15230 3695 aa-1.09□□□□□ -2.58
CXXC4-203ENST00000515509 MYH7P12883 1935 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 OOSP1A8MZH6 123 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 WHAMMP3Q1A5X7 153 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 KRTAP20-2Q3LI61 65 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 UQCR10Q9UDW1 63 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 ARL2-SNX15V9GYD0 113 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 SETBP1Q9Y6X0 1596 aa-1.1□□□□□ -2.59
CXXC4-203ENST00000515509 SYS1-DBNDD2H3BUS1 97 aa-1.11□□□□□ -2.59
CXXC4-203ENST00000515509 COX8AP10176 69 aa-1.11□□□□□ -2.59
CXXC4-203ENST00000515509 PCNX1Q96RV3 2341 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 FDCSPQ8NFU4 85 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 USMG5Q96IX5 58 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 FAM167A-AS1Q96KT0 104 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 EHBP1L1Q8N3D4 1523 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 A2ML1A8K2U0 1454 aa-1.12□□□□□ -2.59
CXXC4-203ENST00000515509 SETD2Q9BYW2 2564 aaPredicted RBP-1.13□□□□□ -2.59
CXXC4-203ENST00000515509 K7EP13 123 aa-1.13□□□□□ -2.59
CXXC4-203ENST00000515509 LCN9Q8WX39 176 aa-1.13□□□□□ -2.59
CXXC4-203ENST00000515509 C1orf167Q5SNV9 1468 aa-1.13□□□□□ -2.59
CXXC4-203ENST00000515509 UBE2L5PA0A1B0GUS4 154 aa-1.14□□□□□ -2.59
CXXC4-203ENST00000515509 UBE2L3P68036 154 aaKnown RBP-1.14□□□□□ -2.59
CXXC4-203ENST00000515509 APLNQ9ULZ1 77 aa-1.14□□□□□ -2.59
CXXC4-203ENST00000515509 KTN1Q86UP2 1357 aaKnown RBP-1.14□□□□□ -2.59
CXXC4-203ENST00000515509 FAT1Q14517 4588 aa-1.14□□□□□ -2.59
CXXC4-203ENST00000515509 ADGRL2O95490 1459 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 AKAIN1P0CW23 69 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 SPRR2EP22531 72 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 PRO1933Q9H354 126 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 NF1P21359 2839 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 FMN2Q9NZ56 1722 aa-1.15□□□□□ -2.59
CXXC4-203ENST00000515509 SCN7AQ01118 1682 aa-1.16□□□□□ -2.59
CXXC4-203ENST00000515509 DEFB135Q30KP9 77 aa-1.16□□□□□ -2.6
CXXC4-203ENST00000515509 C9orf153Q5TBE3 101 aa-1.16□□□□□ -2.6
CXXC4-203ENST00000515509 PP6455Q8WZ26 134 aa-1.16□□□□□ -2.6
CXXC4-203ENST00000515509 DPH3P1Q9H4G8 78 aa-1.16□□□□□ -2.6
CXXC4-203ENST00000515509 CREBBPQ92793 2442 aa-1.16□□□□□ -2.6
CXXC4-203ENST00000515509 TCHHQ07283 1943 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 A0A0G2JMZ2 1700 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 XRN1Q8IZH2 1706 aaKnown RBP-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 CPSF4LA6NMK7 179 aaKnown RBP-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 UBE2D3P61077 147 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 GNG11P61952 73 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 UBE2D2P62837 147 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 TSC22D3Q99576 134 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 DIP2CQ9Y2E4 1556 aa-1.17□□□□□ -2.6
CXXC4-203ENST00000515509 FAM223BA6NKX1 122 aa-1.18□□□□□ -2.6
CXXC4-203ENST00000515509 F6UZH7 168 aa-1.18□□□□□ -2.6
CXXC4-203ENST00000515509 ATP5EP56381 51 aaPredicted RBP-1.18□□□□□ -2.6
CXXC4-203ENST00000515509 Q0VG73 95 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms