RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 UBE2L6O14933 153 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 Q8N814 137 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 WFDC9Q8NEX5 89 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
SMAD1-215ENST00000515385 DEFB131AP59861 70 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 CD164Q04900 197 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 APC2O95996 2303 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 SPTBN2O15020 2390 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 INSP01308 110 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
SMAD1-215ENST00000515385 MED13LQ71F56 2210 aa9.02□□□□□ -0.96
SMAD1-215ENST00000515385 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
SMAD1-215ENST00000515385 Q6ZRU5 148 aa9.01□□□□□ -0.97
SMAD1-215ENST00000515385 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 PRM2P04554 102 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 TACC2O95359 2948 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 ADORA2A-AS1P86434 159 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 CACNA1HO95180 2353 aa9□□□□□ -0.97
SMAD1-215ENST00000515385 A0A087WZ39 114 aa8.99□□□□□ -0.97
SMAD1-215ENST00000515385 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
SMAD1-215ENST00000515385 CXCL6P80162 114 aa8.99□□□□□ -0.97
SMAD1-215ENST00000515385 C11orf44Q8N8P7 122 aa8.99□□□□□ -0.97
SMAD1-215ENST00000515385 F8WEM9 126 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 IGHV4-38-2P0DP08 117 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 PDE6GP18545 87 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 CACNA1BQ00975 2339 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 DOPEY2Q9Y3R5 2298 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 H3BQ85 93 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 Q6ZQT0 140 aa8.98□□□□□ -0.97
SMAD1-215ENST00000515385 LINC01547P58512 204 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-215ENST00000515385 RBM3P98179 157 aaKnown RBP8.97□□□□□ -0.97
SMAD1-215ENST00000515385 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
SMAD1-215ENST00000515385 TRGV1A0A0A0MS02 117 aa8.96□□□□□ -0.98
SMAD1-215ENST00000515385 A0A1W2PPR1 153 aa8.96□□□□□ -0.98
SMAD1-215ENST00000515385 PLAC8L1A1L4L8 177 aa8.96□□□□□ -0.98
SMAD1-215ENST00000515385 RMI2Q96E14 147 aa8.96□□□□□ -0.98
SMAD1-215ENST00000515385 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
SMAD1-215ENST00000515385 PTPRZ1P23471 2315 aaPredicted RBP8.96□□□□□ -0.98
SMAD1-215ENST00000515385 ERC2-IT1O76042 136 aa8.95□□□□□ -0.98
SMAD1-215ENST00000515385 C6orf223Q8N319 242 aa8.95□□□□□ -0.98
SMAD1-215ENST00000515385 UBE2E2Q96LR5 201 aa8.95□□□□□ -0.98
SMAD1-215ENST00000515385 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
SMAD1-215ENST00000515385 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
SMAD1-215ENST00000515385 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
SMAD1-215ENST00000515385 ZFHX2Q9C0A1 2572 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-215ENST00000515385 ADGRG4Q8IZF6 3080 aa8.93□□□□□ -0.98
SMAD1-215ENST00000515385 TRAV10A0A0B4J240 114 aa8.93□□□□□ -0.98
SMAD1-215ENST00000515385 Q6ZVQ6 151 aa8.93□□□□□ -0.98
SMAD1-215ENST00000515385 MAP6D1Q9H9H5 199 aa8.93□□□□□ -0.98
SMAD1-215ENST00000515385 RIF1Q5UIP0 2472 aaKnown RBP8.93□□□□□ -0.98
SMAD1-215ENST00000515385 A0A096LNT2 108 aa8.93□□□□□ -0.98
SMAD1-215ENST00000515385 MIFP14174 115 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 HAMPP81172 84 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 Q6ZTI0 123 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 RETNQ9HD89 108 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 C9orf66Q5T8R8 295 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 Q8IZM0 81 aa8.92□□□□□ -0.98
SMAD1-215ENST00000515385 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
SMAD1-215ENST00000515385 C10orf99Q6UWK7 81 aa8.91□□□□□ -0.98
SMAD1-215ENST00000515385 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
SMAD1-215ENST00000515385 MAP1BP46821 2468 aaKnown RBP8.91□□□□□ -0.98
SMAD1-215ENST00000515385 COX17Q14061 63 aa8.9□□□□□ -0.98
SMAD1-215ENST00000515385 IGHV4-61A0A0C4DH41 118 aa8.89□□□□□ -0.99
SMAD1-215ENST00000515385 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
SMAD1-215ENST00000515385 Q8N3U1 123 aa8.89□□□□□ -0.99
SMAD1-215ENST00000515385 BOD1L1Q8NFC6 3051 aa8.88□□□□□ -0.99
SMAD1-215ENST00000515385 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
SMAD1-215ENST00000515385 IGLV4-60A0A075B6I1 120 aa8.87□□□□□ -0.99
SMAD1-215ENST00000515385 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SMAD1-215ENST00000515385 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
SMAD1-215ENST00000515385 MSMBP08118 114 aa8.87□□□□□ -0.99
SMAD1-215ENST00000515385 SPTBN4Q9H254 2564 aa8.87□□□□□ -0.99
SMAD1-215ENST00000515385 NREPQ16612 68 aa8.86□□□□□ -0.99
SMAD1-215ENST00000515385 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
SMAD1-215ENST00000515385 TMEM254Q8TBM7 123 aa8.86□□□□□ -0.99
SMAD1-215ENST00000515385 DYNLRB2Q8TF09 96 aa8.86□□□□□ -0.99
SMAD1-215ENST00000515385 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-215ENST00000515385 TM2D3Q9BRN9 247 aa8.85□□□□□ -0.99
SMAD1-215ENST00000515385 ASPMQ8IZT6 3477 aa8.85□□□□□ -0.99
SMAD1-215ENST00000515385 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
SMAD1-215ENST00000515385 SLURP1P55000 103 aa8.85□□□□□ -0.99
SMAD1-215ENST00000515385 STHQ8IWL8 128 aa8.85□□□□□ -0.99
SMAD1-215ENST00000515385 GVINP1Q7Z2Y8 2422 aa8.84□□□□□ -0.99
SMAD1-215ENST00000515385 C11orf68Q9H3H3 251 aaKnown RBP8.84□□□□□ -0.99
SMAD1-215ENST00000515385 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
SMAD1-215ENST00000515385 MUC7Q8TAX7 377 aa8.84□□□□□ -0.99
SMAD1-215ENST00000515385 DEFB114Q30KQ6 69 aa8.83□□□□□ -1
SMAD1-215ENST00000515385 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
SMAD1-215ENST00000515385 ESRGQ1W209 222 aa8.82□□□□□ -1
SMAD1-215ENST00000515385 BPY2O14599 106 aa8.82□□□□□ -1
SMAD1-215ENST00000515385 DEFB112Q30KQ8 113 aa8.82□□□□□ -1
SMAD1-215ENST00000515385 C16orf74Q96GX8 76 aa8.82□□□□□ -1
SMAD1-215ENST00000515385 NOP10Q9NPE3 64 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms