RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 C5orf47Q569G3 176 aa5.32□□□□□ -1.56
CCDC30-214ENST00000514642 PCNX1Q96RV3 2341 aa5.32□□□□□ -1.56
CCDC30-214ENST00000514642 PRRC2AP48634 2157 aaKnown RBP5.32□□□□□ -1.56
CCDC30-214ENST00000514642 PRYO14603 147 aa5.32□□□□□ -1.56
CCDC30-214ENST00000514642 RTL8CO15255 209 aa5.32□□□□□ -1.56
CCDC30-214ENST00000514642 C6orf99Q4VX62 202 aa5.32□□□□□ -1.56
CCDC30-214ENST00000514642 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
CCDC30-214ENST00000514642 TMEM258P61165 79 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 COX6A2Q02221 97 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 H3BT86 120 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 ATG2AQ2TAZ0 1938 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 LST1O00453 97 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
CCDC30-214ENST00000514642 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
CCDC30-214ENST00000514642 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
CCDC30-214ENST00000514642 IGKV3D-7A0A0C4DH55 119 aa5.3□□□□□ -1.56
CCDC30-214ENST00000514642 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
CCDC30-214ENST00000514642 Q6JHZ5 121 aa5.3□□□□□ -1.56
CCDC30-214ENST00000514642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.3□□□□□ -1.56
CCDC30-214ENST00000514642 ROS1P08922 2347 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 NRACQ8N912 160 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 MRPS12O15235 138 aaKnown RBP5.29□□□□□ -1.56
CCDC30-214ENST00000514642 NUPR1O60356 82 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 V9GYY9 64 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 ABCA1O95477 2261 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 CCKP06307 115 aa5.29□□□□□ -1.56
CCDC30-214ENST00000514642 POLR2KP53803 58 aaKnown RBP5.29□□□□□ -1.56
CCDC30-214ENST00000514642 RPL37AP61513 92 aaKnown RBP5.28□□□□□ -1.56
CCDC30-214ENST00000514642 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 LINC00336Q6ZUF6 198 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 ESRGQ1W209 222 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 NACAE9PAV3 2078 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 LINC00315P59091 139 aa5.28□□□□□ -1.56
CCDC30-214ENST00000514642 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
CCDC30-214ENST00000514642 K7ERS5 55 aa5.27□□□□□ -1.57
CCDC30-214ENST00000514642 SLPIP03973 132 aa5.27□□□□□ -1.57
CCDC30-214ENST00000514642 Q9BRP9 147 aa5.27□□□□□ -1.57
CCDC30-214ENST00000514642 CSDC2Q9Y534 153 aaKnown RBP5.27□□□□□ -1.57
CCDC30-214ENST00000514642 FREM1Q5H8C1 2179 aa5.27□□□□□ -1.57
CCDC30-214ENST00000514642 FXYD2P54710 66 aa5.26□□□□□ -1.57
CCDC30-214ENST00000514642 Q6ZRP5 223 aa5.26□□□□□ -1.57
CCDC30-214ENST00000514642 K7EIL1 84 aa5.26□□□□□ -1.57
CCDC30-214ENST00000514642 Q6ZVQ6 151 aa5.26□□□□□ -1.57
CCDC30-214ENST00000514642 ATOX1O00244 68 aa5.26□□□□□ -1.57
CCDC30-214ENST00000514642 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
CCDC30-214ENST00000514642 COA6Q5JTJ3 125 aaKnown RBP5.26□□□□□ -1.57
CCDC30-214ENST00000514642 Q6ZQY7 126 aa5.25□□□□□ -1.57
CCDC30-214ENST00000514642 TTTY13Q9BZ97 58 aa5.25□□□□□ -1.57
CCDC30-214ENST00000514642 B5MCH6 92 aa5.25□□□□□ -1.57
CCDC30-214ENST00000514642 EXPH5Q8NEV8 1989 aa5.25□□□□□ -1.57
CCDC30-214ENST00000514642 J3KT08 172 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 A8MZ25 164 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 LINC00242Q5T6M2 205 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 ATP5EP2Q5VTU8 51 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 Q6ZRU5 148 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 CNFNQ9BYD5 112 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
CCDC30-214ENST00000514642 X6R8D5 127 aa5.24□□□□□ -1.57
CCDC30-214ENST00000514642 KRTAP10-11P60412 298 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 SMIM11BQ8TCY0 68 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 TRBV10-3A0A0K0K1G6 114 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 SHANK1Q9Y566 2161 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 C22orf24Q9Y442 160 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 KIF25-AS1Q9Y6Z4 181 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 TANC2Q9HCD6 1990 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 LINC00694P0DN24 101 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
CCDC30-214ENST00000514642 Q6ZSN1 163 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 TYMSOSQ8TAI1 123 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 Q8NAQ8 132 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 CUL9Q8IWT3 2517 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 Q6Q795 121 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 SCXQ7RTU7 201 aa5.22□□□□□ -1.57
CCDC30-214ENST00000514642 SMIM1B2RUZ4 78 aa5.21□□□□□ -1.58
CCDC30-214ENST00000514642 CRYGAP11844 174 aa5.21□□□□□ -1.58
CCDC30-214ENST00000514642 WFDC13Q8IUB5 93 aa5.21□□□□□ -1.58
CCDC30-214ENST00000514642 C11orf72Q8NBR9 251 aa5.21□□□□□ -1.58
CCDC30-214ENST00000514642 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
CCDC30-214ENST00000514642 COL27A1Q8IZC6 1860 aaPredicted RBP5.21□□□□□ -1.58
CCDC30-214ENST00000514642 NBASA2RRP1 2371 aa5.2□□□□□ -1.58
CCDC30-214ENST00000514642 DOPEY2Q9Y3R5 2298 aa5.2□□□□□ -1.58
CCDC30-214ENST00000514642 SMCR5Q8TEV8 140 aa5.2□□□□□ -1.58
CCDC30-214ENST00000514642 IGIPA6NJ69 53 aa5.2□□□□□ -1.58
CCDC30-214ENST00000514642 C19orf73Q9NVV2 129 aa5.2□□□□□ -1.58
CCDC30-214ENST00000514642 COX8CQ7Z4L0 72 aa5.19□□□□□ -1.58
CCDC30-214ENST00000514642 TRIAP1O43715 76 aa5.19□□□□□ -1.58
CCDC30-214ENST00000514642 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
CCDC30-214ENST00000514642 PRLHP81277 87 aa5.18□□□□□ -1.58
CCDC30-214ENST00000514642 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
CCDC30-214ENST00000514642 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
CCDC30-214ENST00000514642 RETNLBQ9BQ08 111 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms