RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 MBD3L1Q8WWY6 194 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 A0A1B0GV50 99 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 NDUFA1O15239 70 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 CRYGAP11844 174 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 KCNRGQ8N5I3 272 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 C11orf52Q96A22 123 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 SMDT1Q9H4I9 107 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 ALG5Q9Y673 324 aa5.23□□□□□ -1.57
CAST-239ENST00000513666 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 FXYD6-FXYD2A0A087WZ82 144 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 TRAV13-1A0A0B4J241 112 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 C7orf77A4D0Y5 90 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
CAST-239ENST00000513666 TMEM241Q24JQ0 296 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 GAGE2EQ4V326 116 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 C10orf25Q5T742 122 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 SMIM15Q7Z3B0 74 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 CYTL1Q9NRR1 136 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 GAGE2DQ9UEU5 116 aa5.22□□□□□ -1.57
CAST-239ENST00000513666 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
CAST-239ENST00000513666 UNQ6190/PRO20217Q6UXQ8 127 aa5.21□□□□□ -1.58
CAST-239ENST00000513666 FAM213BQ8TBF2 198 aa5.21□□□□□ -1.58
CAST-239ENST00000513666 ORAOV1Q8WV07 137 aa5.21□□□□□ -1.58
CAST-239ENST00000513666 RNASE7Q9H1E1 156 aaKnown RBP5.21□□□□□ -1.58
CAST-239ENST00000513666 ST20Q9HBF5 79 aa5.21□□□□□ -1.58
CAST-239ENST00000513666 C6orf48Q9UBA6 75 aa5.21□□□□□ -1.58
CAST-239ENST00000513666 CSDC2Q9Y534 153 aaKnown RBP5.21□□□□□ -1.58
CAST-239ENST00000513666 RAB19A4D1S5 217 aa5.2□□□□□ -1.58
CAST-239ENST00000513666 NUPR1O60356 82 aa5.2□□□□□ -1.58
CAST-239ENST00000513666 GIPP09681 153 aaPredicted RBP5.2□□□□□ -1.58
CAST-239ENST00000513666 GNG4P50150 75 aa5.2□□□□□ -1.58
CAST-239ENST00000513666 LINC00173Q6ZV60 143 aa5.2□□□□□ -1.58
CAST-239ENST00000513666 TRBV27A0A0K0K1C4 114 aa5.19□□□□□ -1.58
CAST-239ENST00000513666 POLR2KP53803 58 aaKnown RBP5.19□□□□□ -1.58
CAST-239ENST00000513666 CCL20P78556 96 aa5.19□□□□□ -1.58
CAST-239ENST00000513666 SMAGPQ0VAQ4 97 aa5.19□□□□□ -1.58
CAST-239ENST00000513666 BIN3Q9NQY0 253 aa5.19□□□□□ -1.58
CAST-239ENST00000513666 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
CAST-239ENST00000513666 TRBV20OR9-2A0A075B6H5 130 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 UMAD1C9J7I0 102 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
CAST-239ENST00000513666 LINC00304Q8N9R0 145 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 CTDSP1Q9GZU7 261 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 MANBALQ9NQG1 85 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 Q6ZUT4 128 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 PPDPFQ9H3Y8 114 aa5.18□□□□□ -1.58
CAST-239ENST00000513666 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
CAST-239ENST00000513666 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
CAST-239ENST00000513666 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
CAST-239ENST00000513666 ANAPC11Q9NYG5 84 aa5.17□□□□□ -1.58
CAST-239ENST00000513666 GNG13Q9P2W3 67 aa5.17□□□□□ -1.58
CAST-239ENST00000513666 TRBV30A0A0K0K1B3 111 aa5.16□□□□□ -1.58
CAST-239ENST00000513666 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
CAST-239ENST00000513666 FCER1GP30273 86 aa5.16□□□□□ -1.58
CAST-239ENST00000513666 TIMM21Q9BVV7 248 aa5.16□□□□□ -1.58
CAST-239ENST00000513666 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
CAST-239ENST00000513666 ARPC5O15511 151 aa5.15□□□□□ -1.58
CAST-239ENST00000513666 KIAA0087Q14695 138 aa5.15□□□□□ -1.58
CAST-239ENST00000513666 LINC00242Q5T6M2 205 aa5.15□□□□□ -1.58
CAST-239ENST00000513666 SLC7A5P1Q8MH63 180 aa5.15□□□□□ -1.58
CAST-239ENST00000513666 C22orf24Q9Y442 160 aa5.15□□□□□ -1.58
CAST-239ENST00000513666 VCYO14598 125 aa5.14□□□□□ -1.59
CAST-239ENST00000513666 PDE6DO43924 150 aa5.14□□□□□ -1.59
CAST-239ENST00000513666 BCE1O60756 84 aa5.14□□□□□ -1.59
CAST-239ENST00000513666 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
CAST-239ENST00000513666 LBHQ53QV2 105 aaPredicted RBP5.14□□□□□ -1.59
CAST-239ENST00000513666 MED9Q9NWA0 146 aa5.14□□□□□ -1.59
CAST-239ENST00000513666 K7EN84 100 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 RAB4AP20338 218 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 ZNF345Q14585 488 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 C2orf82Q6UX34 121 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 LINC00337Q8N6G1 96 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 FAM104AQ969W3 186 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 TMEM18Q96B42 140 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
CAST-239ENST00000513666 KIR2DL4Q99706 377 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 TMEM191AQ9H0A3 160 aa5.13□□□□□ -1.59
CAST-239ENST00000513666 HMSDA8MTL9 139 aa5.12□□□□□ -1.59
CAST-239ENST00000513666 TP73-AS1Q9UF72 201 aa5.12□□□□□ -1.59
CAST-239ENST00000513666 IGKV2D-26A0A0A0MRZ7 120 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 TGIF2-C20orf24A0A0A6YYL0 155 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 A8MWL6 223 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 H0Y8G0 127 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
CAST-239ENST00000513666 SUMO2P61956 95 aaKnown RBP5.11□□□□□ -1.59
CAST-239ENST00000513666 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
CAST-239ENST00000513666 MRPL55Q7Z7F7 128 aaKnown RBP5.11□□□□□ -1.59
CAST-239ENST00000513666 TCTE3Q8IZS6 198 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 OCC1Q8TAD7 63 aa5.11□□□□□ -1.59
CAST-239ENST00000513666 IFITM10A6NMD0 228 aa5.1□□□□□ -1.59
CAST-239ENST00000513666 ZNF727A8MUV8 499 aa5.1□□□□□ -1.59
CAST-239ENST00000513666 SMKR1H3BMG3 65 aa5.1□□□□□ -1.59
CAST-239ENST00000513666 GATCO43716 136 aaKnown RBP5.1□□□□□ -1.59
CAST-239ENST00000513666 PPP1R17O96001 155 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms