RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SPANXA1Q9NS26 97 aa4.6□□□□□ -1.67
HTT-212ENST00000513639 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
HTT-212ENST00000513639 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
HTT-212ENST00000513639 A0A096LNI7 61 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 MT-ND4LP03901 98 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 HNRNPA3P51991 378 aaKnown RBP4.59□□□□□ -1.67
HTT-212ENST00000513639 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
HTT-212ENST00000513639 RNF151Q2KHN1 245 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
HTT-212ENST00000513639 TMEM136Q6ZRR5 245 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 ORMDL3Q8N138 153 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 LINC00526Q96FQ7 95 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
HTT-212ENST00000513639 D6R8Y8 96 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 PTTG1IPP53801 180 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 PNRC1Q12796 327 aaPredicted RBP4.58□□□□□ -1.68
HTT-212ENST00000513639 GAGE2BQ13066 116 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 ODF1Q14990 250 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 SPINK6Q6UWN8 80 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 Q6ZRP5 223 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 C5orf38Q86SI9 138 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 OR10D4PQ8NGN7 298 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 IMMP2LQ96T52 175 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 SMIM2Q9BVW6 85 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 LAMTOR2Q9Y2Q5 125 aa4.58□□□□□ -1.68
HTT-212ENST00000513639 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 G0S2P27469 103 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 RPL39P62891 51 aaKnown RBP4.57□□□□□ -1.68
HTT-212ENST00000513639 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
HTT-212ENST00000513639 RNASE13Q5GAN3 156 aaKnown RBP4.57□□□□□ -1.68
HTT-212ENST00000513639 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 PRELID3AQ96N28 172 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 PYGO1Q9Y3Y4 419 aa4.57□□□□□ -1.68
HTT-212ENST00000513639 TGIF2-C20orf24A0A0A6YYL0 155 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 K7EMI3 77 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 NPYP01303 97 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
HTT-212ENST00000513639 Q6ZUT4 128 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 LINC01600Q96MT4 127 aa4.56□□□□□ -1.68
HTT-212ENST00000513639 MRPL35Q9NZE8 188 aaKnown RBP4.56□□□□□ -1.68
HTT-212ENST00000513639 NDUFA1O15239 70 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 SPAG11BQ08648 103 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 SRSF9Q13242 221 aaKnown RBP eCLIP4.55□□□□□ -1.68
HTT-212ENST00000513639 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 VCX2Q9H322 139 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
HTT-212ENST00000513639 A0A087WZ39 114 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.54□□□□□ -1.68
HTT-212ENST00000513639 NPSP0C0P6 89 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 RPL18AQ02543 176 aaKnown RBP4.54□□□□□ -1.68
HTT-212ENST00000513639 ORMDL2Q53FV1 153 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
HTT-212ENST00000513639 PAPPA-AS1Q5QFB9 102 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 Q6ZN92 141 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 Q8N8P6 123 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 OPRPNQ99935 248 aaPredicted RBP4.54□□□□□ -1.68
HTT-212ENST00000513639 C2orf88Q9BSF0 95 aa4.54□□□□□ -1.68
HTT-212ENST00000513639 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 MT-ND6P03923 174 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 TLX1NBP0CAT3 122 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 SEC11AP67812 179 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 TEX43Q6ZNM6 134 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 NXT2Q9NPJ8 142 aaKnown RBP4.53□□□□□ -1.68
HTT-212ENST00000513639 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.68
HTT-212ENST00000513639 TNXBP22105 4242 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
HTT-212ENST00000513639 PACRGQ96M98 296 aaPredicted RBP4.52□□□□□ -1.69
HTT-212ENST00000513639 TRAV9-1A0A075B6T8 112 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 LINC01549A6NIU2 74 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 PRSS2P07478 247 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 UBE2D1P51668 147 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 CKS1BP61024 79 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 CLLU1Q5K131 121 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 UQCC3Q6UW78 93 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 AMELXQ99217 191 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
HTT-212ENST00000513639 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 NDUFC2-KCTD14E9PQ53 114 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 HERVK_113P63121 156 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 KIAA0087Q14695 138 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 DIRC1Q969H9 104 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms