RNA–Protein interactions for RNA: ENST00000512317.5

SPARCL1-207, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-207ENST00000512317 C5orf38Q86SI9 138 aa2.89□□□□□ -1.95
SPARCL1-207ENST00000512317 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
SPARCL1-207ENST00000512317 NIT2Q9NQR4 276 aa2.89□□□□□ -1.95
SPARCL1-207ENST00000512317 TRAV13-1A0A0B4J241 112 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 A0A1B0GVG6 124 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 KRTAP10-8P60410 259 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 AMMECR1LQ6DCA0 310 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 C9orf62Q8N4C0 152 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 LINC01600Q96MT4 127 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 MANBALQ9NQG1 85 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
SPARCL1-207ENST00000512317 A0A0D9SG52 128 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 HMSDA8MTL9 139 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 UMAD1C9J7I0 102 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 GATCO43716 136 aaKnown RBP2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 TRGC1P0CF51 173 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 ESDP10768 282 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 CACNG7P62955 275 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 HERV-K104P63124 156 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 SRSF9Q13242 221 aaKnown RBP eCLIP2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 FAM19A5Q7Z5A7 132 aaPredicted RBP2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 TCEAL7Q9BRU2 100 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 VCX2Q9H322 139 aa2.87□□□□□ -1.95
SPARCL1-207ENST00000512317 TRAV8-4A0A0B4J246 113 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 TRAV1-1A0A0B4J248 108 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 RPS20P60866 119 aaKnown RBP2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 C1orf137Q5JT78 98 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 OR5A1Q8NGJ0 315 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 C7orf33Q8WU49 177 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 CNFNQ9BYD5 112 aa2.86□□□□□ -1.95
SPARCL1-207ENST00000512317 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 HIGD1CA8MV81 97 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 TCAPO15273 167 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 SCO1O75880 301 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 NPYP01303 97 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 SRP19P09132 144 aaKnown RBP2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 KRTAP1-4P0C5Y4 121 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 RAB4AP20338 218 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 PMCHP20382 165 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 POLR2KP53803 58 aaKnown RBP2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 MRPL51Q4U2R6 128 aaKnown RBP2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 C2orf82Q6UX34 121 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 UNQ6190/PRO20217Q6UXQ8 127 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 LINC01551Q86U37 167 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 LINC00469Q8N7U9 141 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 NUP35Q8NFH5 326 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 CDC42SE2Q9NRR3 84 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 C6orf48Q9UBA6 75 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 UBE2D4Q9Y2X8 147 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 CHTOPQ9Y3Y2 248 aaKnown RBP2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 V9GYV3 84 aa2.85□□□□□ -1.95
SPARCL1-207ENST00000512317 IGHV1-58A0A0C4DH39 117 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 C7orf77A4D0Y5 90 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 F2Z2F3 143 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 H0Y8G0 127 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 I3L3M4 83 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 PDE6DO43924 150 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 PKIAP61925 76 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 TMEM97Q5BJF2 176 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 Q6ZRP5 223 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 ZNF664Q8N3J9 261 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 ORAOV1Q8WV07 137 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 MRAP2Q96G30 205 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 CAMK2N2Q96S95 79 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 ST20Q9HBF5 79 aa2.84□□□□□ -1.95
SPARCL1-207ENST00000512317 TRBV6-5A0A0K0K1A5 114 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 COX7A2LO14548 114 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 MT-ND6P03923 174 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 RPL23P62829 140 aaKnown RBP2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 ADIRFQ15847 76 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 TCTE3Q8IZS6 198 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 ISOC2Q96AB3 205 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 SMIM7Q9BQ49 75 aa2.83□□□□□ -1.96
SPARCL1-207ENST00000512317 TRBV27A0A0K0K1C4 114 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 LOC107984640A0A0U1RRK4 108 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 A0A1B0GUT8 65 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 ZNF727A8MUV8 499 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 D6R8Y8 96 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 APOMO95445 188 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 TSPAN13O95857 204 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 KIAA0087Q14695 138 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 SS18Q15532 418 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 SPINK6Q6UWN8 80 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 FAM231DQ6ZW35 169 aa2.82□□□□□ -1.96
SPARCL1-207ENST00000512317 MRPL52Q86TS9 123 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms