RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 SETBP1Q9Y6X0 1596 aa-0.12□□□□□ -2.43
NPHP3-210ENST00000512094 MYOM3Q5VTT5 1437 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 PRG4Q92954 1404 aaPredicted RBP-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 ZNF236Q9UL36 1845 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 TCHHQ07283 1943 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 KIF21AQ7Z4S6 1674 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 ADGRB1O14514 1584 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 TRAV30A0A087WSZ9 112 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 FAM24AA6NFZ4 105 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 SNAPC5O75971 98 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 IGLC1P0CG04 106 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 UBE2L3P68036 154 aaKnown RBP-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 CCDC58Q4VC31 144 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 MEIG1Q5JSS6 88 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 C10orf113Q5VZT2 155 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 SFTA2Q6UW10 78 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 FAM223AQ8IWN6 122 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 C8orf59Q8N0T1 100 aaPredicted RBP-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 DEFB123Q8N688 67 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 TMEM263Q8WUH6 116 aaKnown RBP-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 DPH3Q96FX2 82 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 FAM167A-AS1Q96KT0 104 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 LINC01600Q96MT4 127 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 AMELXQ99217 191 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 C12orf57Q99622 126 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 VAMP8Q9BV40 100 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 CRIPTQ9P021 101 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 LINC01558Q9Y6Z2 57 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 ACACAQ13085 2346 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 PDE4DIPQ5VU43 2346 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 CSMD3Q7Z407 3707 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 NSD3Q9BZ95 1437 aa-0.13□□□□□ -2.43
NPHP3-210ENST00000512094 DOCK1Q14185 1865 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 HECTD1Q9ULT8 2610 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 KDM5AP29375 1690 aaKnown RBP-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 ITPR3Q14573 2671 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 CFTRP13569 1480 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 GRIN2AQ12879 1464 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 A0A1B0GU69 56 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 UBE2L5PA0A1B0GUS4 154 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 LINC00959A0A1B0GUT2 108 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 NAP1L6A6NFF2 107 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 CRYM-AS1A6NIL9 109 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 GNG7O60262 68 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 COX6CP09669 75 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 AKAIN1P0CW23 69 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 UBE2D3P61077 147 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 UBE2D2P62837 147 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 GNGT1P63211 74 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 SELENOWP63302 87 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 H1FX-AS1Q4G0G2 97 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 COMMD6Q7Z4G1 85 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 SVBPQ8N300 66 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 LSM10Q969L4 123 aaKnown RBP-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 FAM107BQ9H098 131 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 LINC00472Q9H8W2 130 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 PSENENQ9NZ42 101 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 LAMC1P11047 1609 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 RAPGEF6Q8TEU7 1601 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 HMGXB3Q12766 1538 aa-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 CPSF1Q10570 1443 aaKnown RBP-0.14□□□□□ -2.43
NPHP3-210ENST00000512094 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 BICRAQ9NZM4 1560 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 PATJQ8NI35 1801 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 MAGI1Q96QZ7 1491 aaPredicted RBP-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 DSTQ03001 7570 aaKnown RBP-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 KIAA0556O60303 1618 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 CEP290O15078 2479 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 SPTY2D1-AS1A0A0U1RR47 76 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 LOC100130705A0A1B0GUX0 176 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 H3BQF6 201 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 SAA2P0DJI9 122 aaPredicted RBP-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 SPRR2AP35326 72 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 ATP5EP56381 51 aaPredicted RBP-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 KRTDAPP60985 99 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 BTG2P78543 158 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 LRP2P98164 4655 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 Q0VG73 95 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 DEFB112Q30KQ8 113 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 KRTAP20-2Q3LI61 65 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 C6orf201Q7Z4U5 140 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 C5orf38Q86SI9 138 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 C9orf62Q8N4C0 152 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 LCN9Q8WX39 176 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 SPANXDQ9BXN6 97 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 LINC00470Q9BZP3 86 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 PRO1854Q9UHT4 67 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 LRRK2Q5S007 2527 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 RIMS1Q86UR5 1692 aaKnown RBP-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 MYH7P12883 1935 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 PSME4Q14997 1843 aa-0.15□□□□□ -2.43
NPHP3-210ENST00000512094 MUC2Q02817 5179 aa-0.16□□□□□ -2.43
NPHP3-210ENST00000512094 FMN2Q9NZ56 1722 aa-0.16□□□□□ -2.43
NPHP3-210ENST00000512094 MTORP42345 2549 aa-0.16□□□□□ -2.43
NPHP3-210ENST00000512094 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms