RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 LECT2O14960 151 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 PRSS1P07477 247 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 SMAGPQ0VAQ4 97 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 LINC01545Q5VT33 79 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 Q6ZN92 141 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 MRPL52Q86TS9 123 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 NTN5Q8WTR8 489 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
PDLIM5-215ENST00000511586 IGLV10-54A0A075B6I4 117 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 WFDC2Q14508 124 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 C14orf177Q52M58 125 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 DGAT2L7PQ6IED9 249 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 C2orf66Q6UXQ4 117 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 LINC00469Q8N7U9 141 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 OR5A1Q8NGJ0 315 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 TOMM6Q96B49 74 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 PMCHL2Q9BQD1 86 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 CSDC2Q9Y534 153 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
PDLIM5-215ENST00000511586 IGKV3OR2-268A0A0C4DH90 116 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 GCSHP23434 173 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 DDTP30046 118 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 ERASQ7Z444 233 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 TIMM21Q9BVV7 248 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
PDLIM5-215ENST00000511586 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 hDV102S1A0JD36 115 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 USP17L23D6RBM5 183 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 DPM2O94777 84 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 ODF1Q14990 250 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 MAJINQ3KP22 176 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 TMEM141Q96I45 108 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
PDLIM5-215ENST00000511586 TRAV12-1A0A0B4J245 112 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 LINC00959A0A1B0GUT2 108 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 LINC00587B1AMM8 73 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 IGKCP01834 107 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 PLNP26678 52 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 RPL39P62891 51 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 SS18Q15532 418 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 SPANXA1Q9NS26 97 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 UQCR10Q9UDW1 63 aa4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-215ENST00000511586 F8VRH5 84 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 CCL25O15444 150 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 XCL1P47992 114 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 HNRNPA3P51991 378 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 PMVKQ15126 192 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 PAPPA-AS1Q5QFB9 102 aa4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 MRPL35Q9NZE8 188 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 CHTOPQ9Y3Y2 248 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-215ENST00000511586 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 IGLC3P0DOY3 106 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 MRPS36P82909 103 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 FOXI1Q12951 378 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 Q6ZUT4 128 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 C14orf144Q96I85 54 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 PYGO1Q9Y3Y4 419 aa4.67□□□□□ -1.66
PDLIM5-215ENST00000511586 TRAV13-1A0A0B4J241 112 aa4.66□□□□□ -1.66
PDLIM5-215ENST00000511586 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
PDLIM5-215ENST00000511586 CD164L2Q6UWJ8 174 aa4.66□□□□□ -1.66
PDLIM5-215ENST00000511586 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-215ENST00000511586 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.66
PDLIM5-215ENST00000511586 IGLV4-3A0A075B6K6 122 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 NPSP0C0P6 89 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 NMUP48645 174 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 XGP55808 180 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 HERVK_113P61574 105 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 LINC01620Q4KN68 170 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 STPG4Q8N801 248 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 C15orf56Q8N910 161 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 FAM104AQ969W3 186 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 C2orf88Q9BSF0 95 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 VCX2Q9H322 139 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 CST9LQ9H4G1 147 aa4.65□□□□□ -1.67
PDLIM5-215ENST00000511586 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 IGHV1-58A0A0C4DH39 117 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 COX7A2LO14548 114 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 COX8AP10176 69 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 CNBPP62633 177 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 C9orf163Q8N9P6 203 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 CHAC1Q9BUX1 264 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 FAM30AQ9NZY2 134 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
PDLIM5-215ENST00000511586 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms