RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
HMGB2-205ENST00000511316 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
HMGB2-205ENST00000511316 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
HMGB2-205ENST00000511316 GAGE12JA6NER3 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 GAGE7O76087 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 SLURP1P55000 103 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 GAGE4Q13068 117 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
HMGB2-205ENST00000511316 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
HMGB2-205ENST00000511316 IGHV3-64A0A075B6Q5 118 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 SYNJ2BPP57105 145 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 HERV-K104P63124 156 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 DGAT2L7PQ6IED9 249 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 H7C423 109 aa9.26□□□□□ -0.93
HMGB2-205ENST00000511316 HOXD3P31249 432 aaPredicted RBP9.26□□□□□ -0.93
HMGB2-205ENST00000511316 INSP01308 110 aa9.25□□□□□ -0.93
HMGB2-205ENST00000511316 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
HMGB2-205ENST00000511316 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 RS1O15537 224 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 C15orf53Q8NAA6 179 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
HMGB2-205ENST00000511316 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
HMGB2-205ENST00000511316 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
HMGB2-205ENST00000511316 TRACP01848 142 aa9.23□□□□□ -0.93
HMGB2-205ENST00000511316 ATP5G1P05496 136 aa9.23□□□□□ -0.93
HMGB2-205ENST00000511316 TMEM101Q96IK0 257 aa9.23□□□□□ -0.93
HMGB2-205ENST00000511316 COX7A2LO14548 114 aa9.22□□□□□ -0.93
HMGB2-205ENST00000511316 ADAMTSL4-AS1Q5T5F5 129 aa9.22□□□□□ -0.93
HMGB2-205ENST00000511316 SORL1Q92673 2214 aa9.22□□□□□ -0.93
HMGB2-205ENST00000511316 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.93
HMGB2-205ENST00000511316 TRAV25A0A0B4J276 109 aa9.21□□□□□ -0.93
HMGB2-205ENST00000511316 EDN2P20800 178 aa9.21□□□□□ -0.93
HMGB2-205ENST00000511316 DEFB131AP59861 70 aa9.21□□□□□ -0.93
HMGB2-205ENST00000511316 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.93
HMGB2-205ENST00000511316 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.93
HMGB2-205ENST00000511316 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.93
HMGB2-205ENST00000511316 K7EIL1 84 aa9.21□□□□□ -0.94
HMGB2-205ENST00000511316 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
HMGB2-205ENST00000511316 DEFB104AQ8WTQ1 72 aa9.21□□□□□ -0.94
HMGB2-205ENST00000511316 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
HMGB2-205ENST00000511316 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
HMGB2-205ENST00000511316 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
HMGB2-205ENST00000511316 C9orf66Q5T8R8 295 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 C11orf72Q8NBR9 251 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
HMGB2-205ENST00000511316 LINC01587Q99440 93 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
HMGB2-205ENST00000511316 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
HMGB2-205ENST00000511316 DYNLRB2Q8TF09 96 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
HMGB2-205ENST00000511316 HUWE1Q7Z6Z7 4374 aaKnown RBP9.18□□□□□ -0.94
HMGB2-205ENST00000511316 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
HMGB2-205ENST00000511316 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
HMGB2-205ENST00000511316 IGLV1-51P01701 117 aa9.18□□□□□ -0.94
HMGB2-205ENST00000511316 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
HMGB2-205ENST00000511316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
HMGB2-205ENST00000511316 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
HMGB2-205ENST00000511316 LINC00643Q86TS7 51 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 DAND5Q8N907 189 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 Q9H8V8 135 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
HMGB2-205ENST00000511316 HTN1P15515 57 aa9.16□□□□□ -0.94
HMGB2-205ENST00000511316 CXCL5P42830 114 aa9.16□□□□□ -0.94
HMGB2-205ENST00000511316 CEMP1Q6PRD7 247 aaPredicted RBP9.16□□□□□ -0.94
HMGB2-205ENST00000511316 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
HMGB2-205ENST00000511316 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.94
HMGB2-205ENST00000511316 B5MCH6 92 aa9.15□□□□□ -0.95
HMGB2-205ENST00000511316 MEIG1Q5JSS6 88 aa9.15□□□□□ -0.95
HMGB2-205ENST00000511316 IL17DQ8TAD2 202 aa9.15□□□□□ -0.95
HMGB2-205ENST00000511316 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
HMGB2-205ENST00000511316 RBMY1BA6NDE4 496 aaKnown RBP9.14□□□□□ -0.95
HMGB2-205ENST00000511316 RBMY1EA6NEQ0 496 aaKnown RBP9.14□□□□□ -0.95
HMGB2-205ENST00000511316 SMIM1B2RUZ4 78 aa9.14□□□□□ -0.95
HMGB2-205ENST00000511316 K7EQD1 137 aa9.14□□□□□ -0.95
HMGB2-205ENST00000511316 RBMY1DP0C7P1 496 aaKnown RBP9.14□□□□□ -0.95
HMGB2-205ENST00000511316 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-205ENST00000511316 DEFB114Q30KQ6 69 aa9.13□□□□□ -0.95
HMGB2-205ENST00000511316 MRAPQ8TCY5 172 aa9.13□□□□□ -0.95
HMGB2-205ENST00000511316 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
HMGB2-205ENST00000511316 Q6ZSN1 163 aa9.12□□□□□ -0.95
HMGB2-205ENST00000511316 H0YGX0 51 aa9.12□□□□□ -0.95
HMGB2-205ENST00000511316 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
HMGB2-205ENST00000511316 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
HMGB2-205ENST00000511316 UBE2L6O14933 153 aa9.11□□□□□ -0.95
HMGB2-205ENST00000511316 CRPP02741 224 aa9.11□□□□□ -0.95
HMGB2-205ENST00000511316 STHQ8IWL8 128 aa9.11□□□□□ -0.95
HMGB2-205ENST00000511316 NPC2P61916 151 aa9.1□□□□□ -0.95
HMGB2-205ENST00000511316 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
HMGB2-205ENST00000511316 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms